Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00571 ATGAAAGTGTGTGAGAAGGTGGAACGCAAAGGGAGAACTACTTATAATGAGTTGTCTCCTTCCTGTTCTTTCTTTGCAAGTAAACACGGTAGCGTAATAGATGAACTTGTGGCTGAGTTTGCTGACCCAAACAATAGTATTTCTTCTCCAAATCAGCAACAATATGGTGAAAAGAATATCCGTCGAAGAGTTTATGATGCTTTGAATGTTCTCATGGTAATGGACATTATTTCTAaggataaaaaggaaatacaaTGGAAAGGTCTTCCTCGTACTAGTCTGAATGATATTGAAGAGCTGAAGACGGAATATCTTGGGGTCAGGAATAGGATTGAAAAGAAAGCAGCCTATCTGTA 356 0.368 MKVCEKVERKGRTTYNELSPSCSFFASKHGSVIDELVAEFADPNNSISSPNQQQYGEKNIRRRVYDALNVLMVMDIISKDKKEIQWKGLPRTSLNDIEELKTEYLGVRNRIEKKAAYL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00571 118 PANTHER TRANSCRIPTION FACTOR DP 1 118 IPR015648 GO:0005667|GO:0051726
Bva02g00571 118 SUPERFAMILY "Winged helix" DNA-binding domain 1 89 IPR036390 -
Bva02g00571 118 Pfam E2F/DP family winged-helix DNA-binding domain 1 88 IPR003316 GO:0005667|GO:0006355
Bva02g00571 118 Gene3D - 25 95 IPR036388 -
Bva02g00571 118 SMART E2F_TDP_2 1 88 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00571 Bva-Chr2 7386783 7388369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00571 3 118 E2F-DP Transcription Factor Family AT5G02470 47.863 2.16e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bva02g00571 E2F_TDP 1.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00571 K04683 - qsu:112000390 181.03