Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00566 ATGGTTGCACAATATTCTTTGAGAGATTTACTTTTGCATTGTTGTGTGGATGATGCTCCTGATGTTCGACAAAGTGCCTTTGCTTTGCTTGGAGATCTTGCCAGAGTGTACCCAGCACATTTACACCCTCGTTTGTCTGAGTTTCTTGACGCTGCAGCCAAGCAGGACCCTAATAGAAGTTTTAGCTATAgagttgaattttatatacccatcttattaaaatataagatgtaTTATGTGCAGGAAACTTCTAAGGCAAAGGAGAATATTTCAATAGCAAATAATGCATGCTGGGCAATTGGAGAATTAGCAgTTCGTCAGGAGATCTCCCCAATCGTTTTGACAGTCATCTCATGCTTGATCACAATTATTCAGCATGCTGAGGGAGGAGAAGAGGACAATTTTGCCGTTGTATTTGCAGTTATGGAAGTTCACATGGAAACTGCACAGTTTTTTAAACGTGACTTTGAGGAGAACGGCTCAATGGAGAGAGTGACCCTTCTAAATCTGGCAAATGATCCCACAATTGAGCATATCATCACCCCTCGTATTGCCCTCAGTACTGCTGAATATTTGGCATATGAATGCGGGAAGCATGTTCTTGTGATATTTACAGATATGAGTTCATATGCCGATGCTCTTCGTGAGGTATCTGCTGCACGTGAGGAAGTGCCTGGAAGACGTGGATATCCTGATATCACACATCCAGCTCCCGATCTTACGGGATATATTACTGAGGGTCAGATATACATCGACAGGCAGCTGCATAACAGACAGGTATATCATGTTGAAGCTTTGGTTTTAGTCTATAGTATACAATATGCTGGATCAGTGACAGGAATATACCAACCTATAAATGTCCTTCCATCGTTGTCTCGGTTGATGAAGAGTGCCATTGATGATAGAATGACTCGAAGAGATCATGTTGATGTGTCCAATCAGCTctatacaaattatattattggaaAGAACgtccaaaaaatgaaaactatgCTGCATCTGGAATTcttggacaagtttgagaggAAATATGTCACCCAAGGAGCTTATGACACCCTTAATATCTTAGAGTCACTTGATCTTGCATGGACTTTGCTTCGAATCTTCCCCCACGAACTTCTTCACCGTATACTAGCAAAGACACTCGATCAAATATTATA 1160 0.3819 MVAQYSLRDLLLHCCVDDAPDVRQSAFALLGDLARVRQEISPIVLTVISCLITIIQHAEGGEEDNFAVVFAVMEVHMETAQFFKRDFEENGSMERVTLLNLANDPTIEHIITPRIALSTAEYLAYECGKHVLVIFTDMSSYADALREVSAAREEVPGRRGYPDITHPAPDLTGYITEGQIYIDRQLHNRQVYHVEALVLVYSIQYAGSVTGIYQPINVLPSLSRLMKSAIDDRMTRRDHVDVSNQLYTNYIIGKNVQKMKTMLHLEFLDKFERKYVTQGAYDTLNILESLDLAWTLLRIFPHELLHRILAKTLDQIL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00566 317 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 58 162 - -
Bva02g00566 317 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 163 193 - -
Bva02g00566 317 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 163 193 IPR022879 -
Bva02g00566 317 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 58 162 IPR022879 -
Bva02g00566 317 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 211 316 IPR022879 -
Bva02g00566 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 228 IPR027417 -
Bva02g00566 317 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 62 162 IPR000194 GO:0005524
Bva02g00566 317 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 211 316 - -
Bva02g00566 317 Gene3D - 163 193 - -
Bva02g00566 317 Gene3D - 203 317 - -
Bva02g00566 317 Gene3D - 46 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00566 Bva-Chr2 6754517 6759044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00566 62 315 Primary Pumps ATPases(2) AT4G38510 68.106 5.75e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00566 K02147 - osa:4341339 382.104