Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00563 ATGGCTACTTGTGCTTTACTCAGTGGTCGCACTAGTAGCGCTGACGCAGCTGATACCGATGCCAACGACAATAATGTGAATACTTATGTTGGAACTGCGAGTACGACCAGCACCTCCAACTCGAGCAACATCAGCAGCGAAGAACACAGCTTGCATCGTAGGACCCCATCCGACAAAAAGATGGTGAGAAAGAGGATGGCCTCTGAAATGGAAGTCCATACCATGCCCACCGCCACTGGAGATTATCTCAGGTTTCCCCGTCGAAGTGCCATGTCCACGTTTAATTGCTCTTCATCCGCCGCAGAAAAAGCGGACGCGGCAAGTTTTTATAGCTATCCTTATAATTCTTCACGAGATAATGTTAATGTTTCTAACCCcaaccccaaccccaaccccaaccCCACTGTGACGGTTCCCATTCCCAACTACTCCACTATTCTCCTATCTTCTTCCGCCAATCTGACCACCATGACGTCAGGCGAAAATCCCTGTGGGTCTGGATCTTTACTATCTACCAACATCACCACCGCTGCTCCGAACTATAGTATTCGTCATTGTGGAGAGACCCTATCTCGTCATCATCCTCTTCAAGGACTTCAGCCCCAAAGCCATAACCATAACCCCAACCCGAACCCTTCTCCTGCTCCTGCAGTCTGTGGATTTTCGGGGTTACCACTGTTTCCTTCTGAAAGAAATCGAGATAATTATACTAGAAACAGCAGTGGTACTGGTTCTGTTGAAGTTGCTGCTTCTGCCACAAGCACACCCATGGAAGACGCATCCGCCACGGCTTGGATCGACGGCATCTTAAAGGATCTCATACACAGCTCCAGCAATGTCTCCATACCTCAGCTCATCAACAACGTGAGGGAGATAATCTATCCTTGCAACCCCAACCTCGCTGTCGTTCTTGAATACAGGTTGCGTCTGCTCACATCCGCAACTGAGTCTATTCCAAACTatacagcagcagcagcagagagaaaaagaacggAAGGGATGCCTGCAGTAGCCTCGGGTTTGAATCAAAGGCCCTTCGGTCAGCATCCTCAAGCAGCTGCTGGTTCCTCGTCCGGGCTGAAGCTCAGTCGAATGGATGACATTGTTCCCAATATGCATTTTCCTGATTCAACTGCGGCTTCAGCTTCTCCCGCAGTTATAAATCAGATATACTCGAATTGGGGAGTATCTCCCATCACTGCCTTAACCCACGATGGGGGAAACCCTTCGGTGGTTACTTTACCGTCACCACCACTATCATCGTCAAATAATCAGAGTTATTCGCCGCCGCAACCTCAAGAGAAGCAGCAACATCAGCATGAGAGTAACAATCACCAAGAGGAAGCTGGCTCTTCTCCTTCTGAACATGGAGCAGCAACGGCAGCGGCTGCAGATGTCATCctaacaagaaagaagaaagaggagaTGCGGCAACAGAAAAGAGACGAAGAAGGGTTACACATCCTTACTTTGCTCCTTCAGTGTGCGGAGGCTGTCTCTGCTGATAATTTAGAAGAAGCTAACAAGATGTTGTTAGAAATCTCGCAACTATCGACACCATTTGGAACGTCAGTTCAGAGGGTGGCAGCTTACTTCTCAGAAGCCATATCGGCAAGGCTAGTCAGCTCGTGCTTGGGAATATACGCCACTCTGCCTACGGTTCCCCACAGTCAGAAGATGGCTTCGGCCTTCCAGGTCTTCAACGGCATCAGTCCTTTTGTCAAGTTCTCGCACTTCACAGCTAACCAAGCTATACAGGAAGCATTTGAGAGGGAGGAGAGGGTGCACATCGTAGATCTGGACATAATGCAGGGGCTTCAATGGCCTGGTCTCTTTCACATATTGGCTTCAAGACCCGGTGGACCGCCGTATGTGAGGCTCACGGGGCTTGGCACCTCCATGGAGGCTCTGGAAGCTACGGGTAAGCGTTTGTCTGATTTTGCCAATAAACTGGGACTTCCCTTTGAGTTCTTTCCGGTCGCCGGAAAAGTTGGAAACCTGGATCCGGAGAGGCTCAATGTGAGCAAGACGGAAGCTGTTGCCGTTCACTGGTTACAACATTCCCTTTACGATGTCACCGGCTCCGATACAAACACGCTCTGGCTTTTGCAAAGGCTGGCACCTAAAGTGGTGACGGTGGTAGAGCAGGACCTAAGCCACGCTGGTTCTTTTTTGGGAAGGTTTGTTGAAGCCATACACTACTATTCAGCACTATTTGATTCGCTTGGGTCTAGCTACGGGGAAGAAAGCGAGGAAAGGCATGTGGTGGAGCAGCAACTATTGTCCAGGGAGATACGCAACGTGCTGGCCGTTGGGGGACCGTCAAGGAGCGGAGAGCTCAAGTTCCACAACTGGAGGGAGAAGCTTCAGCAGTGTGGATTCAGAGGCATCTCTCTGGCTGGCAATGCTGCCACGCAGGCCAGCCTGCTCCTCGGCATGTTTCCATCTGATGGTTATACCTTGGTGGAGGATAATGGCACCCTCAAACTTGGTTGGAAAGACCTTTGCTTGCTCACTGCTTCTGCTTGGAGGCCTCCATTTCAAAATAGCACCGTTATCACTCATCGTAATTA 2573 0.485 MATCALLSGRTSSADAADTDANDNNVNTYVGTASTTSTSNSSNISSEEHSLHRRTPSDKKMVRKRMASEMEVHTMPTATGDYLRFPRRSAMSTFNCSSSAAEKADAASFYSYPYNSSRDNVNVSNPNPNPNPNPTVTVPIPNYSTILLSSSANLTTMTSGENPCGSGSLLSTNITTAAPNYSIRHCGETLSRHHPLQGLQPQSHNHNPNPNPSPAPAVCGFSGLPLFPSERNRDNYTRNSSGTGSVEVAASATSTPMEDASATAWIDGILKDLIHSSSNVSIPQLINNVREIIYPCNPNLAVVLEYRLRLLTSATESIPNYTAAAAERKRTEGMPAVASGLNQRPFGQHPQAAAGSSSGLKLSRMDDIVPNMHFPDSTAASASPAVINQIYSNWGVSPITALTHDGGNPSVVTLPSPPLSSSNNQSYSPPQPQEKQQHQHESNNHQEEAGSSPSEHGAATAAAADVILTRKKKEEMRQQKRDEEGLHILTLLLQCAEAVSADNLEEANKMLLEISQLSTPFGTSVQRVAAYFSEAISARLVSSCLGIYATLPTVPHSQKMASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIVDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVAGKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGELKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWRPPFQNSTVITHRN 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00563 857 MobiDBLite consensus disorder prediction 230 254 - -
Bva02g00563 857 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 195 846 IPR005202 -
Bva02g00563 857 Pfam GRAS domain family 490 844 IPR005202 -
Bva02g00563 857 MobiDBLite consensus disorder prediction 407 461 - -
Bva02g00563 857 MobiDBLite consensus disorder prediction 232 254 - -
Bva02g00563 857 MobiDBLite consensus disorder prediction 1 46 - -
Bva02g00563 857 MobiDBLite consensus disorder prediction 344 358 - -
Bva02g00563 857 MobiDBLite consensus disorder prediction 407 437 - -
Bva02g00563 857 MobiDBLite consensus disorder prediction 47 61 - -
Bva02g00563 857 ProSiteProfiles GRAS family profile. 479 844 IPR005202 -
Bva02g00563 857 MobiDBLite consensus disorder prediction 193 217 - -
Bva02g00563 857 MobiDBLite consensus disorder prediction 338 360 - -
Bva02g00563 857 PANTHER PROTEIN SCARECROW 195 846 - -
Bva02g00563 857 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00563 Bva-Chr2 6730582 6733828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00563 470 845 GRAS Transcription Factor Family AT3G54220 87.105 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva02g00563 GRAS 3.4e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00563 - - gmx:100806779 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00563 02 6730582 6733828 Bva02g00563 02 6730582 6733828 ECH