Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00530 ATGATTCTAATGTCCTACATTGTTACAATACAAATCTTTTTCCTGCTGCTATTGATTTCCCAAACTTCAGCTAATATAAATTCAGAAAAACAAGCGCTCCTTGATTTTGTTGGCGCAGTTCATCACGGTGAGAAAGTGAATTGGAACCATGCTACCTCAATGTGCACTTCTTGGGTGGGAATAACTTGCAGTCCAGATGGCTCTCATGTGATTGCCGTCCGGCTTCCGGCCACCGGACTGCGTGGTTGTATTCCGGCCAACACCCTTGGTGCCCTGAAAGGCCTCACAGCACTCAGTCTTCGCTCCAACACTCTCAGTGGGAAACTTCCACCTGACATACTTTCCCTTCCTTCTCTCCGCTTTATATACTTGCAGCACAACAACTTTTCCGGTGATATTGCTCAGTTTCTCTCCCTCAGGCTTAGCATTGTTGATCTTTCCCACAACTCTTTTACAGGAAAGATTCCAACTTCGATACGAAACTTGGAAAATCTAACTGGACTGTACCTCCAGAATAACTCTCTCATTGGACATATCCCTCATGTTAACCTTCCAAAGCTTAAGAACTTAAATTTGAGCTACAATCACTTAAAGGGTCCAATCCCTTCAGCATTCCATAAGTTTTCTGAGTCTTCATTCGAAGGGAATTCGATGTTATGCGGACCGCCACTGGATAAACCTTGTTCAGTTTCCCTTTGTATTTCCCCCTCCAGCAAGAAACTGAGTAAAGGGATTATAGTTGCAATTGCATTAGGGGGTTTCTCTCTGCTGTTCCTTTTGCTTCTGATATTACTATTGTTCTGttccaagaaaaatgatgtttcTCAGAACAGTGAtcataaagagaaagaggagaagCTTAGGGAGGACTTTGGGAGTGGAGTACAGGAACCAGACAAGAACAAGCTAATGTTTTTTCAAGGTTGTTCTTATAGTTTTGATCTTGAGGATTTGTTAAGAGCTTCTGCTGAGGTGCTTGGGAAGGGAGGTTGTGGGACAACTTACAAGGCAATCTTAGAGGATGGGACTCCAGTGGTTGTGAAGAGGTTAAAAGAAGTGTTGGtggggaaaaaagaatttgaacaaCAAATGGAGACTGTGCAGAGGATTGGTCAGCACCCAAACATTATTCCTCTTCGTGCTTACTACTATTCCAAGGACGAAAAGTTAATGGTTTACGACTACATAATGGCTGGAAGCTTTGCCAGATTATTGCATGGAAGCAGGGAAACTGGCAGAACTCCGCTAGATTGGGAAGCCAGACTGGAGATATCACTTGGAGCTGCTAAGGGAATTGCCCATATTCACAATGTCAGTGGAAGGAAATTTGTCCATGGCAATATAAAATCATCTAATATCCTTCTCAAAGCAAACCTTCAAGGCTGCATGTCAGATTTTGGCTTAGCTCCTCTAATAACCACCTCAGTCCACAATACAGGTCCAGGTTACCAAGCACCGGAGGTTATTGAAGGCCGAAAACGGACCCAGAAATGTGATGTTTACAGTTTTGGTGTTGTCCTTCTTGAGATGCTGACGGGCAAACCACCGATTCAGTATTCAGGGCATGATGATGTTGTTCATCTTCCAAGATGGGTGCAATCTGTTGTTAGGGAGGAATGGACTGCCGAAGTGTTTGATGTTGAGCTTATGAGGTATCACAATATTGAAGAAGAATTGGTGCAGATGCTGCAACTGGCAATGGCCTGTGCTGCAAAGGTGCCTGACACGAGACCTTCAATGGAGGAAGTCGTTAAGATGATTGAAGAAATCAGAGAATCCAAATTCTG 1787 0.4225 MILMSYIVTIQIFFLLLLISQTSANINSEKQALLDFVGAVHHGEKVNWNHATSMCTSWVGITCSPDGSHVIAVRLPATGLRGCIPANTLGALKGLTALSLRSNTLSGKLPPDILSLPSLRFIYLQHNNFSGDIAQFLSLRLSIVDLSHNSFTGKIPTSIRNLENLTGLYLQNNSLIGHIPHVNLPKLKNLNLSYNHLKGPIPSAFHKFSESSFEGNSMLCGPPLDKPCSVSLCISPSSKKLSKGIIVAIALGGFSLLFLLLLILLLFCSKKNDVSQNSDHKEKEEKLREDFGSGVQEPDKNKLMFFQGCSYSFDLEDLLRASAEVLGKGGCGTTYKAILEDGTPVVVKRLKEVLVGKKEFEQQMETVQRIGQHPNIIPLRAYYYSKDEKLMVYDYIMAGSFARLLHGSRETGRTPLDWEARLEISLGAAKGIAHIHNVSGRKFVHGNIKSSNILLKANLQGCMSDFGLAPLITTSVHNTGPGYQAPEVIEGRKRTQKCDVYSFGVVLLEMLTGKPPIQYSGHDDVVHLPRWVQSVVREEWTAEVFDVELMRYHNIEEELVQMLQLAMACAAKVPDTRPSMEEVVKMIEEIRESKF 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00530 595 CDD STKc_IRAK 326 590 - -
Bva02g00530 595 Gene3D Ribonuclease Inhibitor 140 230 IPR032675 -
Bva02g00530 595 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Bva02g00530 595 Gene3D Phosphorylase Kinase; domain 1 288 395 - -
Bva02g00530 595 SUPERFAMILY Protein kinase-like (PK-like) 324 588 IPR011009 -
Bva02g00530 595 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00530 595 SUPERFAMILY L domain-like 45 223 - -
Bva02g00530 595 PANTHER OS05G0480400 PROTEIN 9 594 - -
Bva02g00530 595 Gene3D Transferase(Phosphotransferase) domain 1 397 594 - -
Bva02g00530 595 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515
Bva02g00530 595 Pfam Protein kinase domain 323 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00530 595 PANTHER OS05G0588300 PROTEIN 9 594 - -
Bva02g00530 595 Gene3D Ribonuclease Inhibitor 24 139 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00530 Bva-Chr2 6532876 6536968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00530 12 593 Receptor kinase-like Gene Family AT5G58300 58.706 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva02g00530 Pkinase 2.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00530 - - gmx:100810832 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00530 02 6532876 6536968 Bva02g00530 02 6532876 6536968 ECH