Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00522 ATGGCTACTCTACTCCATTCAACTGCAAGTATTCTTCAACATAACCGCATGACAATCTGCTTTTCTCCCCAAAGACCCGCTATTCCAAATAACCTTTGTTTCTTAACAAACCGTTTCAAAAGTAATCCTGCAAAGTGCAATGCATTTATTGATAACATCTCTAAAGATTTGTTGGAGAACACTATTTATCTTGatcaatttccaatttttcGATCTGGGTTAGTGCAATTTCAGAGCGTAACTGAAGACTTATCCGACATCCAGAAATGGGTGTTTCTGGTTTTTGCTGGATTGACGTGGATTTATTTAACTGCAAGGCCTGGTGTTCTTTTTGGCGCCATTGATGCATACCTTCTTGCACCTCTGCAGTTGGGTTTGGATAGTTTCACAGGAAGGAGGAACCTGAAGAGGAGTGATTTTCTGATTGGAGATAAGCTAGGAGAAGGGTCATTTGGCATTGTTTATTCTGGTGTCATTGTTCCAAAGAATGTGGATGTAGAAGAGAGGGAGcagaaaagaggaagaggaagggCAACAGAAAGACTGGCTGTCAAGTCCAAGGATAAAGTCATTCTTAAAAAGGTAAAAGTTGGAATCCAAGGGGCTGAAGAATTTGCTGAATATGAGGAGTGGTTTAATTACAGGCTCTCCAGAGCTGCTCCTGAAACATGTGCGGAGTTCCTTGGAAGTTTTATAGCTGATAAAACAAGCTCACAGTTCGTAAAAGGTGGAAAATGGCTCGTTTGGAAATTTGAGGGAAGTCAAACTCTTGCAGATTACATGAAGGATCGCAGCTTTCCGTCAAACTTAGAGTCTGCAATGTTTGGACGTGTCTTGCAAGGTGTAGACTCTTCTCAAAGAAGTTCTTTGATAATCAAGCAAATAATGCGCCAGATCATTACTTCTCTTAAGAAAATTCATGACACTGGAATTGTCCACCGGGATGTAAAGCCAGAAAATTTAGTGGTCATTAAACGAAGGCAGATTAAACTCATAGATTTTGGTGCAGCAACAGACCTTAGGATTGGAAAGAATTATGTCCCAGACCGTGCCCTTTTGGATCCCGACTACTGTCCCCCTGAGATATATGTACTCCCAGAAGAAACACCAATTCCTCCTCCAGAGCCAGTTGCTGCTTTACTTTCACCAATCCTGTGGCAGTTGAACAGTCCTGATCTGTTTGATATGTATTCTGCTGGGATTGTACTCCTGCAAATGGCAATACCAAACTTAAGGTCTCGAGCTGCTTTAAAGAATTTCAATTTGGAACTAAAATCTTACAGATATGATTTGAACAAATGGAGGGAGAATACTCGTCTCAGGGCTGACTTCCAAATTCTTGATTTGGACTCGGGTAGAGGATGGGATTTGGCAACAAAGCTTATCTCTGAGAGAGGTTTCCTAAGACGAGGACGTTTATCAGCTTCTGCTGCTTTGAGGCATCCTTATTTCCTTTTAGGTGGTGATCAGGCTGCTGCAGTTCTTTCAAAAGCAAAAACCGAGCTGTTCGGTTTCCTCTCTGATTCAGTTAAGCAAGGATG 1541 0.4062 MATLLHSTASILQHNRMTICFSPQRPAIPNNLCFLTNRFKSNPAKCNAFIDNISKDLLENTIYLDQFPIFRSGLVQFQSVTEDLSDIQKWVFLVFAGLTWIYLTARPGVLFGAIDAYLLAPLQLGLDSFTGRRNLKRSDFLIGDKLGEGSFGIVYSGVIVPKNVDVEEREQKRGRGRATERLAVKSKDKVILKKVKVGIQGAEEFAEYEEWFNYRLSRAAPETCAEFLGSFIADKTSSQFVKGGKWLVWKFEGSQTLADYMKDRSFPSNLESAMFGRVLQGVDSSQRSSLIIKQIMRQIITSLKKIHDTGIVHRDVKPENLVVIKRRQIKLIDFGAATDLRIGKNYVPDRALLDPDYCPPEIYVLPEETPIPPPEPVAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPNLRSRAALKNFNLELKSYRYDLNKWRENTRLRADFQILDLDSGRGWDLATKLISERGFLRRGRLSASAALRHPYFLLGGDQAAAVLSKAKTELFGFLSDSVKQG 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00522 513 Gene3D Transferase(Phosphotransferase) domain 1 280 486 - -
Bva02g00522 513 Gene3D Phosphorylase Kinase; domain 1 128 251 - -
Bva02g00522 513 SUPERFAMILY Protein kinase-like (PK-like) 136 485 IPR011009 -
Bva02g00522 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Bva02g00522 513 SMART serkin_6 140 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00522 513 Coils Coil 417 437 - -
Bva02g00522 513 ProSiteProfiles Protein kinase domain profile. 140 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00522 513 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 3 497 IPR044803 GO:0004674|GO:0009579
Bva02g00522 513 Pfam Protein kinase domain 288 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00522 513 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 3 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00522 Bva-Chr2 6493343 6496576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00522 246 484 PP2C-type Phosphatase Gene Family AT3G63340 23.913 1.99e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Bva02g00522 Pkinase 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00522 - - pop:7497580 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00522 02 6493343 6496576 Bva02g00522 02 6493343 6496576 ECH