Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00515 ATGCTGCGCTGGAAAAAAACTTGCAGGTGCATTGAAAACTCATCTCTCTCGTTTCATCATCGCCATCAAAGCAAGCTTCGTTTCATCAATTCCGAGAAGATAAGGAAAGCCAGCCTGATCTGTGCAGGTTTGCTTTTCTTGATTACGGAACTGGGGGCCTCCAGTTTTGCGTGCGTTGGAAGTCTTGCTGGTTCCGAAGCTTCCCTTTTGGAGAGGGGGACTCTATTTACTGGAGATTCTAGTTTTCATTCTGCAGCTGAGCACTTCAAAGCTACTGAATCTTACTTTTCCCAGCAGTTTCCTTTGGAATGCCCCACAAGGGAGCGGAGACGCCTGGTATCGTGGGGCGGAATGGAACTGCATGATATCAACAACAGTAGTGTGCCCTTTGAAATTTCTAGAGGCTCATCTCAATTGCAGGACAAGTTGAATAAATCTCAGAGGATTCGCCACAAGAGTGTGcaatttgaagaaaacatCTTACATGAAGAAAATGCGAGACTGATCTATATCAATGATCCAAAGAAGACAAATGACAAGTATGAGTTCACAGGGAATGAGATCCGAACCAGCAAATACACCATCATAACCTTCCTACCCAAGAATCTTTTCATTCAGTTCCATCGGGTTGCTTATTTGTATTTCCTTGCCATTGCTGCTCTCAATCAGCTTCCTCCACTTGCTGTCTTTGGGAGAACAGTATCGCTTTTCCCCCTTTTGTTTGTGCTTTGTGTCACTGCTATCAAGGATGGCTATGAGGATTGGCGGAGGCACAGGTCAGACCGCAATGAAAATAACCGAGAGTCTCTGGTTATTCAATCTGGTGAGTTCCTGccaaagaaatggaaaaatatacaAGCTGGCGAGGTTGTGAAGATCTTTGCTGATGAGACAATTCCTGCTGATATGGTTTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGTGagtcaaatttgaagacaaGGTATGCTCGCCAAGAAACAGCATCAGCTGTGTTACCAGAACATTGTGCCATTTCTGGGGTTATTAGATGCGAGCAACCTAACAGGAACATTTATGAATTCACTGCTAACATGGAGTTCAATGGACATAAGTTTTCCCTCAGCCAGTCGAACATTGTTTTGCGTGGTTGCCAACTGAAGAACACTGATTGGATAATTGGGGTTGTGGTTTATGCTGGGCAGGAAACAAAAGCAATGATGAACAGTGCCACTTCCCCTTCCAAGAGAAGCAGACTGGAAAGTTACATGAACAGGGAAACCCTTtggttgtcaatttttttgtttatcatgTGTTCTGTTGTGGCCATTGGAATGGGCCTTTGGCTGGTACGCCACAAGAACCAGCTTGATACCTTACCTTACTACAGAAAAAAGTACTTTAGGCAAGGGGCATATAATGGAAAGAAATATAGATATTATGGGATACCTATGGAAacatttatctcttttttgaGTTCTATTATAGTCTTTCAGATAATGATACCAATATCTCTTTACATTACCATGGAGTTGGTTCGTTTGGGTCAGTCGTACTTTATGATTGAAGATGGGGAAATGTATGATTCTAGCTCCGGATCAAGGTTCCAGTGTAGATCCTTGAATATAAATGAAGATTTGGGTCAAATACGTTACATATTTTCAGACAAGACAGGAACACTGACAGAAAACAGAATGGAGTTCCGAAGAGCCAGTATACATGGAAAGAATTATGGGAGCTCCTTGCTTATGGCTGATAACAATTCGGcagcagcagcagtcAGTGGTAAATGGAAGCTCAAATCTGAAATTGCTGTGGATTCTGAACTCATGACAATGTTGCAGGATATCTCAAATAATGATGAAAGGATTGCTGGACATGAGTTTTTCCTTACATTGGCTGCATGTAATACTGTGATCCCTATTCTTAGTCATGGTAGATATTCTAGTTGTGGAACAAATGAATCAAATCAAGAAGTAGAAGGTATTGATTATCAAGGAGAGTCACCTGATGAACAGGCTCTAGTTGCTGCAGCCTCTGCATATGGATATACTCTTTTTGAGCGAACATCTGGGCATATTGTTATTGATGTCAACGGTGAGAAACTCAGGTTGGATGTATTGGGTCTGCATGAGTTTGATAGTGTTCGGAAACGGATGTCTGTTGTTATTCGTCTTCCAAATAATTCTGTTAAGGTTTTGGTTAAAGGTGCGGATACTTCAATGTTTAGCATTTTAGCAAATGTCAGTGAGAGCAATGATAGTGTCCGGAATGCAACTCAGGATCATTTGTATGAATATTCTTCCCAAGGTTTGCGCACTCTTGTAGTTGCCTCCAGGAATCTCTCAGATGCAGAACTTGAGCAGTGGCAAACCATGTATGAAGATGCAAGTACTTCGCTGACTGACAGAGCTGCTAAGCTACGACAAACAGCAACTCTTATAGAATGCAACTTAAAGCTACTTGGAGCAACTGGAATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAATGCCTGCGGCAAGCAGGAATTAAGATCTGGGTTCTTACTGGTGATAAGCAAGAAACGGCCATTTCAATTGGTCTCTCCTGCAAACTCCTCACTGCAGATATGCAGCAGATTATTATAAATGGCACTTCTGAGGCTGAATGCAGAAATCTTTTGGATGATGCTATAGCCCAATATAGTGTGAGATGTTCAAGTGGAAGAGATCAGAATTTAAGTCATAAAACAATAGACGGACGCGGTGATCTTGAGAATGCCAATGGTACAAAGTCATTGGGTATGTCCAAAAGCAATCcaggaaaggaagaaggaactGCTCCACTGGCTCTCATAATTGATGGAAACAGCTTGGTTTACATCTTAGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCTTGTAGGGTTGTGCTATGCTGTCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATCTGATAAAGTGCCGCACTGATGATATGACATTGGCTATAGGCGAtgGGGCCAATGATGTGTCGATGATCCAAATGGCAGATGTTGGCGTTGGAATATGTGGGCAAGAAGGGCGCCAAGCAGTGATGGCAGCAGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAGATTACTTCTAGTGCACGGACACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAATTTCTACCGCAATGCTGTCTTTGTTTTGATGCTATTCTGGTATATACTGTGCACAGCATTCTCTACAACTTCTGCATTAACCGATTGGAGCAGTGTATTCTACTCTGTAATATACACATCTATACCTACTATCATTGTTGGTGTTCTGGACAAAAACTTGAGTCACAGGACACTCTTACAGTATCCAAAACTCTATGGTGCGGGGTACCGGCAGGAGGCTTACAATTTGCGTTTGTTTTGGATCACAATGATTGACACACTATGGCAGAGCCTTGTTCTCTTCTACATTCCCATGTTCACCTACAAAGATAGCTCAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCGGTTGTTGTCCTTGTAAATGTACACTTGGCTATGGACATTCAACGTTGGGTGTTAATTACTCATGTTGCGGTGTGGGGATCAATAGTCATTACATATGGTTGCATGGTGGTATTGGATTCAATACCCGTCTTTCCCAATTACTGGACTATTTATCATCTGTTGAAGTCCCCCACATATTGGGTGACAATTTTGCTTATAACAGTTGTGGGTTTGCTCCCTCGCTTTATTTGCAAAGttgtttatcaaatattttggcCTTCAGATATCCAGATAGCTAGAGAAGCTGAGATATTGAGAAAACGACATAATCGTCAAGGGTCTAGGTGTGAAGTTTCTGGTTA 3905 0.4077 MLRWKKTCRCIENSSLSFHHRHQSKLRFINSEKIRKASLICAGLLFLITELGASSFACVGSLAGSEASLLERGTLFTGDSSFHSAAEHFKATESYFSQQFPLECPTRERRRLVSWGGMELHDINNSSVPFEISRGSSQLQDKLNKSQRIRHKSVQFEENILHEENARLIYINDPKKTNDKYEFTGNEIRTSKYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVIQSGEFLPKKWKNIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASAVLPEHCAISGVIRCEQPNRNIYEFTANMEFNGHKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMMNSATSPSKRSRLESYMNRETLWLSIFLFIMCSVVAIGMGLWLVRHKNQLDTLPYYRKKYFRQGAYNGKKYRYYGIPMETFISFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGEMYDSSSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENRMEFRRASIHGKNYGSSLLMADNNSAAAAVSGKWKLKSEIAVDSELMTMLQDISNNDERIAGHEFFLTLAACNTVIPILSHGRYSSCGTNESNQEVEGIDYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRLPNNSVKVLVKGADTSMFSILANVSESNDSVRNATQDHLYEYSSQGLRTLVVASRNLSDAELEQWQTMYEDASTSLTDRAAKLRQTATLIECNLKLLGATGIEDKLQEGVPEAIECLRQAGIKIWVLTGDKQETAISIGLSCKLLTADMQQIIINGTSEAECRNLLDDAIAQYSVRCSSGRDQNLSHKTIDGRGDLENANGTKSLGMSKSNPGKEEGTAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKCRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMAADFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGVLDKNLSHRTLLQYPKLYGAGYRQEAYNLRLFWITMIDTLWQSLVLFYIPMFTYKDSSIDIWSMGSLWTIAVVVLVNVHLAMDIQRWVLITHVAVWGSIVITYGCMVVLDSIPVFPNYWTIYHLLKSPTYWVTILLITVVGLLPRFICKVVYQIFWPSDIQIAREAEILRKRHNRQGSRCEVSG 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00515 1301 Pfam Phospholipid-translocating P-type ATPase C-terminal 1035 1275 IPR032630 -
Bva02g00515 1301 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 183 1282 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bva02g00515 1301 MobiDBLite consensus disorder prediction 915 942 - -
Bva02g00515 1301 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 160 1298 - -
Bva02g00515 1301 Gene3D - 566 600 IPR023299 GO:0000166
Bva02g00515 1301 SUPERFAMILY Calcium ATPase, transmembrane domain M 183 1274 IPR023298 -
Bva02g00515 1301 Pfam Phospholipid-translocating ATPase N-terminal 169 234 IPR032631 -
Bva02g00515 1301 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 160 1298 - -
Bva02g00515 1301 SUPERFAMILY Calcium ATPase, transduction domain A 266 409 IPR008250 -
Bva02g00515 1301 Pfam Cation transport ATPase (P-type) 658 745 - -
Bva02g00515 1301 Gene3D - 540 552 - -
Bva02g00515 1301 SFLD C1.7: P-type atpase like 540 1058 - -
Bva02g00515 1301 SUPERFAMILY HAD-like 551 1053 IPR036412 -
Bva02g00515 1301 Gene3D - 553 565 IPR023214 -
Bva02g00515 1301 Gene3D - 242 412 - -
Bva02g00515 1301 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 977 1093 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g00515 1301 CDD P-type_ATPase_APLT_Dnf-like 185 1167 - -
Bva02g00515 1301 Gene3D - 821 1047 IPR023214 -
Bva02g00515 1301 ProSitePatterns E1-E2 ATPases phosphorylation site. 558 564 IPR018303 -
Bva02g00515 1301 Pfam E1-E2 ATPase 267 514 - -
Bva02g00515 1301 Gene3D - 664 799 IPR023299 GO:0000166
Bva02g00515 1301 SFLD p-type atpase 540 1058 IPR044492 -
Bva02g00515 1301 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 562 837 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00515 Bva-Chr2 6462366 6469861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00515 146 1286 Primary Pumps ATPases AT5G04930 57.168 0.0 1327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00515 K14802 - gmx:100812459 2044.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00515 02 6462366 6469861 Bva02g00515 02 6462366 6469861 ECH