Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00508 ATGCAATTTAGTGTCAACATCTGCCTCATTCTTGTTTTTGCTCCTCTTCTTGTTCTCTCAGTGGACACAGCTTTCAACGATGATGTGTTGGGGTTGATTGTCTTCAAAGCTGGCCTTGAAGACCCAAAAGGTAAACTTGCGACATGGAATGAAGATGACGTGAGTCCCTGCAAGTGGGACGGAGTCAAATGTGATCCTAGCACCAATCGGGTTTCTGCTCTTGTCCTTGATGGGTTTTCTCTTTCTGGGCATATAGATAAAGGACTTTTAAGATTGCAGTTCCTTCAAGTTCTATCACTTTCCAAGAATAACTTAACAGGGGCCATAAACCCTGATCTTCCTCGCCTTGGGGGTTTACAAGTTGTTGATTTGAGTGAGAATAATCTCTCAGGTTCAATTCCAGATGGATTTTTCCAGCAATGTGGGTCTTTGAGATCAGTTTCTTTCTCCAAAAACAACCTCACAGGTAAGATTCCTGATTCTTTGAGCTCATGTTCCACATTGGCAAGTGTTAACTTCTCTTCCAATCAACTATCTGGGGAATTGCCTTCTGGAATATGGTATCTGAGGGGATTGCAGTCGCTTGATTTGTCAAATAACTTGCTGGAGGGAGAGATTCCTGAAGGGATTGAGAATCTATATGATTTAAGTGAGTTAAGTCTACGGAAGAACCGCTTCATTGGCAGGCTTCCTGTGGGTATTGGAGGATGCTTAGTTTTGAAATCACTTGATTTTAGTGATAACTTTCTCTCTGGAGGACTTCCTGAGTCAATACAAAGACTCAGCTCATGCACATCCCTCAGTTTACGAGGGAATTCATTCACAGGAAGCATTCCTGAATGGATTGGAGAATTGAAAGATTTAGAGTCGTTGGATCTTTCTGCAAATAGATTTTCTGGTTGGATTCCAAAATCAATAGGAAATCTTGATTCCTTGAATAAACTAAATCTCTCCAGTAACCATATTACAGGGAATTTGCCAGATTCATTGGCAAACTGCATTAAGCTTTTGGCCCTTGACATCAGCCACAATCACTTGACTGGAAATCTTCCTTCATGGATTTTTAGGATGGGCGTGCGAAGTATCTCGCTTTCAGGGAACAGCTTTGGCAGGAGCAATTATCCTTCACTTACTTCCACACCTGCATCTTATCATGGTCTTCAGGTTTTGGATTTGTCATCAAATGCATTCTCTGGTGAACTTCCATCTGGCATTGGGAATCTTAGTAGCTTGCAAGTCTTAAATATGTCCACCAACAATATCTCTGGTTCCATTCCGGCTGGTATAGGAGAACTTAAATCTATATCCATTCTTGACTTGAGTGACAACAAGCTTAATGGAAGCATTCCTTCTCAAATAGAAGGAGCAATTTCACTCCTTGAACTGAGGCTGCAAAAGAACTTTCTCAGTGCGAGAATTCCATCCCAAATTTACAAGTGCACTTCCTTAACATCTTTGATTCTTTCTCACAACAAGCTTTCTGGGTCAGTCCCAGCAGCCATTGCAAACCTAACCAATCTTCAGAATGTAGACTTGTCATGGAATGAGCTCTCTGGAAGCTTACCCAAGGAGTTAACAAATCTTTCCTGCCTTATATCCTTTAATGTCTCCCACAACCACCTTGAAGGTGAGCTACCAGTGGGTGGCTTCTTTAATACCATCTCTCCATCATCTCTCTTTGGTAATCCATCTTTATGCGGTTCTGTTGTCAATCACTCCTGCCCATCTGTCCACCCCAAACCTATTGTTCTTAATCCTAACTCTTCAGACTCCAACTCTAGTGCTTCCTCCCTTAGTCGTGGCCATAAGAAGATCATACTCAGTATCTCTGCTCTTATTGCTATTGGAGCTGCTGCTTTTATTGCCATTGGTGTTATTGCTGTTACTCTTCTAAATATCCACGTTCGTAATTCAATGTCAAGAACTGCTGCTCCATTTGCATTTTCTGGTGGCGAGGACTTTAGTTATTCACCCACAGATGATCCAAActatggcaaacttgtaatgtTTTCTGGAGATGCTGACTTTGCCGATGGGGCACATAATCTTCTCAATAAAGATAGTGAAATTGGTCGTGGTGGATTTGGAGTTGTCTATCGTACTGTCATTCGAGATGGGCATTCCGTTGCAATCAAGAAGCTTACAGTGTCAAGTTTGATCAAATCCCAAGAAGACTTCGAGAGGGAAGTCAAAATGCTTGGGAAGATGAGACACCAAAATCTTGTGGGACTGGAAGGCTATTATTGGACTTCATCCTTGCATCTCCTTATTTATGAATACTTCTCCAGAGGGAGTTTGCATAAACTTCTACATGATGAGAACAGTAGGGAAGTCCTTTCTTGGCGGCAAAGGTTCAATATAATTCTTGGCATGGCAAAAGGTTTGGCCTATTTGCACCAAATGAACATAATCCACTATAATCTAAAATCTACCAATGTCCTGATTGATAGTTCTGGCGAGCCAAAAATAGGAGACTATGGCTTGGTGAGGCTATTACCAGTGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTAGGATACATGGCTCCTGAGTTTGCCTGCCGCACGGTGAAGATAACTGAGAAATGCGATATATATGGTTTCGGGATTCTGGTTCTGGAGGTGGTGACAGGAAAAAGACCAGTGGAATACATGGAGGATGATGTAGTTGTTCTGTGTGACATGGTAAGAGGTGCATTGGAGGAAGGCAAGTTGGAGCAATGTGTTGATGAGAAGCTTCTGGGTAATTTTGCTGCAGAAGAAGCAATTCCTGTTTTAAAACTGGGACTAATCTGTGCATCACAAGTACCTTCAAACCGTCCAGACGTGGCTGAGGTAATCAACATATTAGAATTGATCCAATGCCCTTCAGAAGGACAAGAGGAATTAGAATG 2903 0.4168 MQFSVNICLILVFAPLLVLSVDTAFNDDVLGLIVFKAGLEDPKGKLATWNEDDVSPCKWDGVKCDPSTNRVSALVLDGFSLSGHIDKGLLRLQFLQVLSLSKNNLTGAINPDLPRLGGLQVVDLSENNLSGSIPDGFFQQCGSLRSVSFSKNNLTGKIPDSLSSCSTLASVNFSSNQLSGELPSGIWYLRGLQSLDLSNNLLEGEIPEGIENLYDLSELSLRKNRFIGRLPVGIGGCLVLKSLDFSDNFLSGGLPESIQRLSSCTSLSLRGNSFTGSIPEWIGELKDLESLDLSANRFSGWIPKSIGNLDSLNKLNLSSNHITGNLPDSLANCIKLLALDISHNHLTGNLPSWIFRMGVRSISLSGNSFGRSNYPSLTSTPASYHGLQVLDLSSNAFSGELPSGIGNLSSLQVLNMSTNNISGSIPAGIGELKSISILDLSDNKLNGSIPSQIEGAISLLELRLQKNFLSARIPSQIYKCTSLTSLILSHNKLSGSVPAAIANLTNLQNVDLSWNELSGSLPKELTNLSCLISFNVSHNHLEGELPVGGFFNTISPSSLFGNPSLCGSVVNHSCPSVHPKPIVLNPNSSDSNSSASSLSRGHKKIILSISALIAIGAAAFIAIGVIAVTLLNIHVRNSMSRTAAPFAFSGGEDFSYSPTDDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTVIRDGHSVAIKKLTVSSLIKSQEDFEREVKMLGKMRHQNLVGLEGYYWTSSLHLLIYEYFSRGSLHKLLHDENSREVLSWRQRFNIILGMAKGLAYLHQMNIIHYNLKSTNVLIDSSGEPKIGDYGLVRLLPVLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDIYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKLEQCVDEKLLGNFAAEEAIPVLKLGLICASQVPSNRPDVAEVINILELIQCPSEGQEELE 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00508 967 SUPERFAMILY L domain-like 45 371 - -
Bva02g00508 967 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Bva02g00508 967 ProSiteProfiles Protein kinase domain profile. 684 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00508 967 Pfam Leucine rich repeat 265 322 IPR001611 GO:0005515
Bva02g00508 967 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Bva02g00508 967 Pfam Leucine rich repeat 386 445 IPR001611 GO:0005515
Bva02g00508 967 Pfam Leucine rich repeat 459 517 IPR001611 GO:0005515
Bva02g00508 967 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Bva02g00508 967 Gene3D Ribonuclease Inhibitor 183 281 IPR032675 -
Bva02g00508 967 SMART LRR_typ_2 504 527 IPR003591 -
Bva02g00508 967 SMART LRR_typ_2 528 552 IPR003591 -
Bva02g00508 967 SMART LRR_typ_2 189 213 IPR003591 -
Bva02g00508 967 SMART LRR_typ_2 309 332 IPR003591 -
Bva02g00508 967 SMART LRR_typ_2 480 503 IPR003591 -
Bva02g00508 967 SMART LRR_typ_2 285 308 IPR003591 -
Bva02g00508 967 SMART LRR_typ_2 116 140 IPR003591 -
Bva02g00508 967 SMART LRR_typ_2 408 432 IPR003591 -
Bva02g00508 967 Gene3D Ribonuclease Inhibitor 286 577 IPR032675 -
Bva02g00508 967 SUPERFAMILY L domain-like 285 557 - -
Bva02g00508 967 SMART LRR_sd22_2 285 311 - -
Bva02g00508 967 SMART LRR_sd22_2 189 212 - -
Bva02g00508 967 SMART LRR_sd22_2 504 530 - -
Bva02g00508 967 SMART LRR_sd22_2 237 263 - -
Bva02g00508 967 SMART LRR_sd22_2 432 458 - -
Bva02g00508 967 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 958 - -
Bva02g00508 967 Gene3D Phosphorylase Kinase; domain 1 674 760 - -
Bva02g00508 967 SUPERFAMILY Protein kinase-like (PK-like) 685 957 IPR011009 -
Bva02g00508 967 CDD STKc_IRAK 690 956 - -
Bva02g00508 967 PRINTS Leucine-rich repeat signature 432 445 - -
Bva02g00508 967 PRINTS Leucine-rich repeat signature 192 205 - -
Bva02g00508 967 Pfam Protein kinase domain 685 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00508 967 Gene3D Transferase(Phosphotransferase) domain 1 761 965 - -
Bva02g00508 967 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Bva02g00508 967 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 958 - -
Bva02g00508 967 Pfam Leucine Rich Repeat 192 213 IPR001611 GO:0005515
Bva02g00508 967 Pfam Leucine Rich Repeat 240 261 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00508 Bva-Chr2 6418575 6422835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00508 1 966 Receptor kinase-like Gene Family AT3G56370 62.616 0.0 1168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bva02g00508 Pkinase 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00508 - - gmx:100790365 1555.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00045 01 344609 348539 Bva02g00508 02 6418575 6422835 BWGD
Bva02g00508 02 6418575 6422835 Bva02g00508 02 6418575 6422835 ECH