Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00502 ATGGCGTCGAGGACTTGCATGAACGTGGCATGTGCCACCTCGACGTCGATTCAGTGGCGCAAAGGTTGGGCGCTGCGATCCGGCGAATTCGCCGATCTCTGTGATAAGTGCGGTGCTGCTTACGAACAATCAACTTTTTGTGATACTTTCCACTCAAAGGATTCTGGCTGGAGGGAGTGCACCATATGTGGCAAGCGTCTTCACTGTGGATGCATTGCTTCTAAGTATTTATTTGAGTTGCTAGATATTGGTGGTGTAAGCTGTATGCACTGTGCAAGGAACGCGGGGATTCAACCTGAGCTGATGAAGATTGTTTCACAGATTGCAAGGATTGAAAAGCCTAATGGGTCCGGGGCTTCTAAAATTGGAAGTGTCAGTGAACTGCAATGCTCATCTGTGGCCAACCAATTAAATGGAAGcagtattgaaaattttaggaGTATGCAAGTAGGAGGATATGCAGATTGTGATGCACTTAAGCAGTGGCTCCAACCTCACAATGTTGATGCTAATCGGCCATCTATTCAACTGAAACAGGAAGAAGCTCTACATTCTGCTGGAGAACCTCGAAGCGCATTGATAACACTACACCAGGAATCTAATGGATCATCTAAGGCtaacaaaacagaaaattctaAGATAGACAAGGAACCAAGAGATGTGTATGAATCATTGGTACAGACAAATCTGAGTATGACCCTTGGTTCTCCTGCAGGAAATTCAAATCCCTTTGGTGGTGTTGTTCttgatgaaagagaaaataataaggcACCATCTCCAATTCTACTGGGGAACAGATCTCGCCATCTTTTACCTAAGCCTCCTAGGTCTAATCTTGCCACAGGCTTGGATACAAATGTAGGTATGGTCTCCCAAATGCGTGTTGCAAGGCCACCTGTTGCTGAAGGACGGGGAAGGAATCAGTTGCTCCCTCGTTATTGGCCTAGGATTACAGATCAAGAATTACAGCAAATATCTGGAGATCCAAATTCAACTATTGTGCCGTTGTTTGAAAAAATGCTTAGTGCAAGTGATGCTGGTCGGATTGGTCGTTTGGTTCTTCCGAAAGCATGTGCTGAAGCATATTTTCCTCCTATCTCTCAACCAGAGGGCCTTCCATTACGTATCCAAGATGTGAAAGGCAAAGAGTGGGTCTTTCAGTTCAGATTTTGGCCCAATAATAACAGCAGGATGTATGTTTTAGAAGGTGTAACCCCATGCATTCAGTCTATGCAGTTGCAAGCTGGAGATACTGTAACATTCAGCCGCATGGACCCTGAGGGGAAACTTATAATGGGGTTCCGGAAGGCAACAAGTACCACTGCAGTACAGGAAACTCATCCGTCTAGCATGCCTAATGGCTCTCGTTCCAGTGAAACTTCCTATTCTGGTGTTTATGAGAATCTACCCTTATTAAGTGGTTACAGTGGCCTTCTTCAGTCACTAAAGGGAAGTTCAGATACAAACATGAATGTGCTATCTAAAAGGTGGAATTCCGCTAGTGGTGAAGTTAATTGGCAAAACATTGAGATGCCTGAAGGCAGGAAAAGAGAGGGCCTACTCCTGCCACCAGGGTTGGTTCCAGACAGAAAAAGAACTCGGAATATTGGGTCAAAAACCAAGAGGTTGGTTATTGATAGCCAGGATGCGTTGGAATTGAAACTTACTTGGGAAGAGGCTCAGGATTTGCTCCGTCCACCTCCATCAGTTAAGCCAAGCCTTGTCATGATTGAGGACCATGAATTTGAAGAATACGAAGATCCTCCTATCTTTGGAAAGAGGAGTATTTTCGTGGCCCGTTCCAATGGGATACAAGAACAAATTGAACAATGGACACAATGTGACAATTGCTCCAAATGGCGTAAGTTGCCTGTGGAGCTACTAGTTCCCCCTAAATGGACATGTGTGGACAATTCATGGGATCAGAGCAGGTGTTCATGTTCTGCACCCAATGAATTGGCCCCGAGGGAAATTGATGATCTTTTGAGACTGAATAAGGaattcaagaaacaaaaaatagcaGCAAGACATAGGCCGTCTCTGGAGCCTGAATCTTCTGGACTGGATGCTTTGGCTAATGCTGCAATTCTTGGAGATGATGCAGCAGGTGACTCTGGCAGGAGTCCAGTTGCTACCACAACGAAACATCCTCGTCATAGACCTGGCTGCTCATGCATTGTCTGTATCCAGCCACCGAGTGGAAAGGGCAAACACAAACCTTCATGCACCTGCAATGTGTGCATGACAGTGAAACGCCGGTTTAAAACCCTAAtgatgagaaagaagaagcGTCAATCAGAACGCGAAGCAGAGATTGCTCAGAGAAATCAGCAATCATGGGGGCCTAGGGAGGAATCAGAAGTAGACAGCACCTCTAGACAACTAACTCCAGTTTATGGTTCAGAGAATGAAGCAAGGGTGCCAAATGAATTGGATCCAAAGGGTCAAACCCATTTGGCTGAAGCTGCAAAGGGAAAATTAGACTTGAATTCGCAGCCTGATCGAGAAGAAATTCAAGCTGGATCAAACAATGTGAGCATGATGAGTCTTCTCCAAGAAGCAAGCCTTCCTTTGGAGACTTATCTGAAGCAAAATGGTCTTACTAGCTTGGCATCTGAGCAACAAGCGAATTCAGCTTCAAATGTACAAGCACAGACGACTAACGACAGTGGGGAAAGGCAGAATGAGGATTGTCCTGCTTCAGCTGTTCAGGAGGAGGAAGGTAGTCAGGAAGAGAACAGCGAGCAAgataaaaaccaaaaccaaaacgaTCCACTCTCATG 2783 0.438 MASRTCMNVACATSTSIQWRKGWALRSGEFADLCDKCGAAYEQSTFCDTFHSKDSGWRECTICGKRLHCGCIASKYLFELLDIGGVSCMHCARNAGIQPIARIEKPNGSGASKIGSVSELQCSSVANQLNGSSIENFRSMQVGGYADCDALKQWLQPHNVDANRPSIQLKQEEALHSAGEPRSALITLHQESNGSSKANKTENSKIDKEPRDVYESLVQTNLSMTLGSPAGNSNPFGGVVLDERENNKAPSPILLGNRSRHLLPKPPRSNLATGLDTNVGMVSQMRVARPPVAEGRGRNQLLPRYWPRITDQELQQISGDPNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATSTTAVQETHPSSMPNGSRSSETSYSGVYENLPLLSGYSGLLQSLKGSSDTNMNVLSKRWNSASGEVNWQNIEMPEGRKREGLLLPPGLVPDRKRTRNIGSKTKRLVIDSQDALELKLTWEEAQDLLRPPPSVKPSLVMIEDHEFEEYEDPPIFGKRSIFVARSNGIQEQIEQWTQCDNCSKWRKLPVELLVPPKWTCVDNSWDQSRCSCSAPNELAPREIDDLLRLNKEFKKQKIAARHRPSLEPESSGLDALANAAILGDDAAGDSGRSPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPSCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQQSWGPREESEVDSTSRQLTPVYGSENEARVPNELDPKGQTHLAEAAKGKLDLNSQPDREEIQAGSNNVSMMSLLQEASLPLETYLKQNGLTSLASEQQANSASNVQAQTTNDSGERQNEDCPASAVQEEEGSQEENSEQDKNQNQNDPLS 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00502 919 ProSiteProfiles B3 DNA-binding domain profile. 329 430 IPR003340 GO:0003677
Bva02g00502 919 SUPERFAMILY DNA-binding pseudobarrel domain 326 429 IPR015300 -
Bva02g00502 919 MobiDBLite consensus disorder prediction 691 712 - -
Bva02g00502 919 Gene3D - 600 656 - -
Bva02g00502 919 MobiDBLite consensus disorder prediction 188 208 - -
Bva02g00502 919 MobiDBLite consensus disorder prediction 750 805 - -
Bva02g00502 919 CDD B3_DNA 327 428 IPR003340 GO:0003677
Bva02g00502 919 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 870 - -
Bva02g00502 919 MobiDBLite consensus disorder prediction 251 270 - -
Bva02g00502 919 MobiDBLite consensus disorder prediction 432 453 - -
Bva02g00502 919 Pfam CW-type Zinc Finger 602 644 IPR011124 GO:0008270
Bva02g00502 919 Gene3D - 307 433 IPR015300 -
Bva02g00502 919 MobiDBLite consensus disorder prediction 764 791 - -
Bva02g00502 919 SMART B3_2 329 429 IPR003340 GO:0003677
Bva02g00502 919 ProSiteProfiles Zinc finger CW-type profile. 597 647 IPR011124 GO:0008270
Bva02g00502 919 MobiDBLite consensus disorder prediction 864 889 - -
Bva02g00502 919 MobiDBLite consensus disorder prediction 864 919 - -
Bva02g00502 919 Pfam B3 DNA binding domain 329 428 IPR003340 GO:0003677
Bva02g00502 919 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00502 Bva-Chr2 6377963 6385732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00502 4 888 B3 DNA Binding Superfamily AT4G32010 48.931 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva02g00502 B3 2.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00502 - - vun:114166687 1415.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00502 02 6377963 6385732 Bva02g00502 02 6377963 6385732 ECH