Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00501 ATGGGGTGTTTCACTGTCTTGAAgagtaagaagaaaaagtctGAACAGAGCATGTATACAAATCGTGTCAACCATAAGGAGCATGTACCTACTGTGCTTCCTGAACCTCAAACTCATACTCGTTCACTAACTGCCCCTCCTAGTTTTAGGACCAGAGTGAAACCTGTTCAACCCACTAATAAAGTTGCCAATAGTCGAACCCGAGCACTGTCTGCACCATCGACTCTAGATGCAGCAGAACAAGATGCATTAGCATCAATTGAATATGAGGAACAAGAAGAGTCTAAACACCGAACTGGATCAATGAAAGAACAACGCTCATCAAGTCCACAGCCTTTACCTCTACCATCTCCTCAGGGGGCTTCTTTGTTGAAGGCTGCTGGAAGCTTTAAGTCAGTGACAGCTAGTGGTCCTCTGTATGCTTCTGGACCTTTGCCGCTGCCACCTACTGGGACACTTAGAAACTTTCCGTTTGAGGATGTTGCAGCTGCCTGCTACAATTTCTCTTCAGATCGATGCATGTCAGAGGGTCTTTCTTCTACCATGTATAAGGCTTCCTTTGGTGATGATGcttcaaattcaaagaaatttgaagcaaCGGTCACTCGATTGCATCCATCAACTCAGGGTTTGAAGGAGTTTACTAATGAGGTTAGTACTATTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTTGGTTTTCATGCACGGGAGGGCTCAGAACAGAGAATGTTGGTTTATGAGAGGCTATACCATGGAGGCCTGGACCGGTTGTTGTATGGAAGATCTGATGGCCCATCCATTGATTGGAATACAAGAATGAAAATTGCATTATGCGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTACAATGAATTTTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCTAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCAGATGCAGAGATCTCAACCAATTCAGTTGCTGTGGCAAATTTATCAATGGAGACACTGGAAAAAGGACTGCTCACACCAAAGAGCAATGTTTGGagttttggaatttttcttcTGGAACTGCTTACTGGAAGAAAGAATCTTGACAGCCGTCACCCTAAGGAGGAGAGGAATTTAGTGAAGTGGAGCCGGCCTTTCCTATCTGATGATTTTCGACTGTCATTAATCATGGATCCCCAGCTTAAAGGTCGCTTTCCTTCCAAAGCAGCAAGGACAGTAGCTGACATTGCACAGAGATGCCTTCAGAAAGAGCCATCTGAAAGACCCACCATGAGAACTGTTGTTGAACATCTTAAAATGATACAGGATGTCAAGTATTCGTGTCGGTTTCCGCTACAAGATCCGGCAGCTATATCTGGTAAACACATGTCAAGATCACCAAGTCTTAATGGTATCATCACTCCTGCGCCAAGATTGAGTTTCTCTCCGTCGCCGCCATCTGCTGCCAGACCTTCTATTTCACCTCCAAGATGGTCTGGTGTGCCCATATCTCTTCCTCCTCGGGCTTGTTCCTCTACTCTCTCTCTTGAGGAACTTGATCGGCAAGAAAGCCGCAAGTCATCTTCAGCCTGCAGGAGGGCTAGTGTTGAAGGATTTTG 1634 0.4364 MGCFTVLKSKKKKSEQSMYTNRVNHKEHVPTVLPEPQTHTRSLTAPPSFRTRVKPVQPTNKVANSRTRALSAPSTLDAAEQDALASIEYEEQEESKHRTGSMKEQRSSSPQPLPLPSPQGASLLKAAGSFKSVTASGPLYASGPLPLPPTGTLRNFPFEDVAAACYNFSSDRCMSEGLSSTMYKASFGDDASNSKKFEATVTRLHPSTQGLKEFTNEVSTIASLQHPNLCKLLGFHAREGSEQRMLVYERLYHGGLDRLLYGRSDGPSIDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPDAEISTNSVAVANLSMETLEKGLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLSDDFRLSLIMDPQLKGRFPSKAARTVADIAQRCLQKEPSERPTMRTVVEHLKMIQDVKYSCRFPLQDPAAISGKHMSRSPSLNGIITPAPRLSFSPSPPSAARPSISPPRWSGVPISLPPRACSSTLSLEELDRQESRKSSSACRRASVEGF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00501 544 ProSiteProfiles Protein kinase domain profile. 168 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00501 544 MobiDBLite consensus disorder prediction 89 103 - -
Bva02g00501 544 MobiDBLite consensus disorder prediction 521 544 - -
Bva02g00501 544 PANTHER OS01G0822200 PROTEIN 44 543 - -
Bva02g00501 544 PANTHER OS01G0588500 PROTEIN-RELATED 44 543 - -
Bva02g00501 544 MobiDBLite consensus disorder prediction 8 22 - -
Bva02g00501 544 Gene3D Transferase(Phosphotransferase) domain 1 252 455 - -
Bva02g00501 544 MobiDBLite consensus disorder prediction 479 509 - -
Bva02g00501 544 MobiDBLite consensus disorder prediction 35 74 - -
Bva02g00501 544 Pfam Protein tyrosine and serine/threonine kinase 174 443 IPR001245 GO:0004672|GO:0006468
Bva02g00501 544 Gene3D Phosphorylase Kinase; domain 1 149 249 - -
Bva02g00501 544 SUPERFAMILY Protein kinase-like (PK-like) 147 452 IPR011009 -
Bva02g00501 544 MobiDBLite consensus disorder prediction 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00501 Bva-Chr2 6373512 6377702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00501 147 449 Receptor kinase-like Gene Family AT4G02010 36.688 1.14e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Bva02g00501 PK_Tyr_Ser-Thr 3.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00501 - - gmx:100809117 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00193 01 1577536 1585679 Bva02g00501 02 6373512 6377702 BWGD
Bva02g00501 02 6373512 6377702 Bva02g00501 02 6373512 6377702 ECH