Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00496 ATGAATTACAGCGAAAAGAACGGAGCAGGAGAAGAGGGGGAATGTAAAGAATCGGTTTTGACGGGTTCTGTTGATTTGGAATCGAAATCAGTGATAAAAAATGGGTTGATAGCAAGCGAGCAGCTAACAATTGATGAGAATCTTTTGGTTGACCCGAAACAATTGTTTATTGCGGCCAAAATTGGTGAGGGAGCTCATGGCAAAGTTTATGAAGGAAGGTATGGGGATCGAATTGTTGCTATTAAAGTTCTACATCGTGGGAATAATTCAGAAGAAAGAGCTTCCCTTGAAAATCGTTTTGCTCGTGAAGTTAATATGATGTCCCGTGTCCATCACGAGAATCTTGTTAAGTTTATTGGAGCTTGCAAGGATCCTCTGATGGTAATAGTTACAGAGCTGTTACCGGGGATGTCTCTTCGCAAATACTTAGTCAGTGTACGGCCAAAACTACTAGACCTTCATGTGGCTATAAACTTTGCCATTGATATTGCTCGAGCCATGGATTGCCTACATGCCAATGGGATCATACACAGAGATCTGAAACCTGACAATCTTTTGCTTACAGCAGATCAGAAGTCTGTTAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTGACTGAAATGATGACTGCAGAAACTGGAACTTACCGTTGGATGGCACCAGAGttATATAGTACTGTGACATTGCGCCAGGGCGAGAAGAAACATTACAATAACAAGGTGGATGTGTACAGTTTTGGAATTGTTTTGTGGGAGCTATTAACAAATCGTATGCCTTTCGAAGGGATGTCCAATCTACAGGCTGCTTATGCTGCTGCATTTAAgCAAGAGAGGCCTATTCTTCCAGATGATATATCCCCTGATCTTGCCTTTATCATACAATCTTGCTGGGTTGAAGATTCTAACTTGAGACCAAGCTTTAATCAGATCATCCGCATGCTCAATGAATTTCTCTTCACACTAGCACCACCCTCACCTCCCTTGCCAGAACCAGACAACATCCAACCTAAACCAGTGACAGGCAACAGCGCCATAACCGAGTATTCGTCCCGGAACAAAGGGAAGTTTGCTTTCCTTCGCCACTTGTTTGCCTCAAAGAGGGTCAAGAACTA 1118 0.4258 MNYSEKNGAGEEGECKESVLTGSVDLESKSVIKNGLIASEQLTIDENLLVDPKQLFIAAKIGEGAHGKVYEGRYGDRIVAIKVLHRGNNSEERASLENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLVSVRPKLLDLHVAINFAIDIARAMDCLHANGIIHRDLKPDNLLLTADQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPILPDDISPDLAFIIQSCWVEDSNLRPSFNQIIRMLNEFLFTLAPPSPPLPEPDNIQPKPVTGNSAITEYSSRNKGKFAFLRHLFASKRVKN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00496 372 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00496 372 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 26 338 - -
Bva02g00496 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Bva02g00496 372 PANTHER SERINE-THREONINE PROTEIN KINASE 26 338 - -
Bva02g00496 372 Pfam Protein tyrosine and serine/threonine kinase 58 316 IPR001245 GO:0004672|GO:0006468
Bva02g00496 372 Gene3D Phosphorylase Kinase; domain 1 38 135 - -
Bva02g00496 372 Gene3D Transferase(Phosphotransferase) domain 1 138 324 - -
Bva02g00496 372 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
Bva02g00496 372 CDD STKc_MAP3K-like 61 316 - -
Bva02g00496 372 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00496 372 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00496 Bva-Chr2 6340421 6343830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00496 43 369 MAP Kinase Kinase Kinase AT5G01850 73.219 0.0 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva02g00496 PK_Tyr_Ser-Thr 3.8e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00496 - - vvi:100244846 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00185 01 1529902 1533140 Bva02g00496 02 6340421 6343830 BWGD
Bva02g00496 02 6340421 6343830 Bva02g00496 02 6340421 6343830 ECH