LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva02g00493	ATGTATAAGATGAGAACAGGTGGTGCCATGGCTCAAGTTGGATATGTTGAAACTGACCCATCTGGGCGTTATGGGCGTTTCAAGGATGTTTTGGGCAGAGGAGCCATGAAGATAGTATACAGAGCATTTGATGAGTTGCTAGGAATTGAAGTGGCTTGGAGCCAAGTCAAGCTTGCAGATGTCTTCCAGTCCCCAGACCAATTGCAGCGCCTTTATTCAGAAGTTCATCTCCTCAAGAACCTTGATCATGACTCCATCATGACCTTCTATGCTTCTTGGATTGATGTCAACCACAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTCAGAGAGTATAGGAAAAAGTACCAGCGGGTAGATATGAGGGCAGTGAAGAACTGGGCTCGGCAAATTCTGCTAGGTCTAGAGTATTTACACAGCCATGATCCTCCTGTAATACATAGAGATCTCAAGTGCGATAATATCTTTGTTAATGGCCATCTGGGGCAGGTCAAGATTGGTGATTTAGGCCTTGCAGCCATTCTTCGTGCCTCTCATCATGCCCACAGTGTGATAGGCACACCAGAATTTATGGCACCTGAATTGTATGAAGAGGATTACAATGAGTTGGTGGACGTATACTCATTCGGAATGTGCATGATAGAGATGCTTACATCAGAGTTTCCATACAGCGAGTGCTCTAACCCAGCTCAAATCTACAAGAAAGTCACTTCGGGAAAGTTGCCTAATGCATTTTACCGAATCGAAGATTTGGAAGCCCAGAGATTAGTGGGAAAATGTCTGGCAAATGTTTCAAAAAGATTGCCAGCCAAGGAGCTCTTGTTGGATCCATTTTTAGCTACTGATCAACTTGAGTTCCCATTGCCATTGCCTATCCCATCAACAATTCAACATCAAAAATCTAACTTTCGTGCTGTTGATGCTATGGAAAATCCTTCAACGGGTGACCAAACAAAGAGCACAAAAATGACCATCACTGGGACATTGAACGAAGATGATGACACAGTGTACCTTAAAGTGCAAATATCAGACAAAAATGGGCATGTCAGGAATATATACTTTCCCTTCGACATTATCAATGATACTGCCATTGCTGTAGCACTGGAGATGGTTAAAGAATTGGAAATCATGGACTTGGAACCATTTGAAATTGCTGAGATGATAGGCGAGGAGATATTAGCTTTGGTTCCAACTTGGAAAGATTGGGGAAAATCCCAGTATAATCGACAACACAGTTTTGCCTATGAAGACGAGGACGATATCAGCAACCATCATGATCATCCTTTCTTCTTATCAGCATCTTCCCCTTCTTCCTCTCAAGCTTCTCTCCCAGTCCCACAGCTGCACCAAAACCAGACCCCATTTGCAGAAGATTGGCTTCAAGATGAACTATTTATGAATGATGATGAGAGCTCCTCAAGCTCAATGAACTCCTTCAAGTATGTGAATTTGAATTACAGCGACTCGGGCTATGAAGATGAGCATGATCAAATAGGAGCTGCTGCTGAACACATTTATTGCAGCCCCATGACTACAAGATTCTGTCCTCGACAACAAGAGATTGAAACTAattttagtaagaaatttaGCAATCTAAGGTTGGATTATTGTATAACATGTCATGGTGGCTGCCCAAGGCTAAGGAGGATGCGTTCCTCTCTGGATGTTCGGAGCCAGCAGCTGCAGCGGTCGTTAATGGAGCAGATAAACAAGAGAAGGATGTTCAAGACAGTTGGAGCCATTGAGAACATTGGCTTTCAACACCCAAATGGAAGTTCTTGTTTTTCTCGTTG	1805	0.4299	MYKMRTGGAMAQVGYVETDPSGRYGRFKDVLGRGAMKIVYRAFDELLGIEVAWSQVKLADVFQSPDQLQRLYSEVHLLKNLDHDSIMTFYASWIDVNHRTFNFITELFTSGTLREYRKKYQRVDMRAVKNWARQILLGLEYLHSHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRASHHAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCMIEMLTSEFPYSECSNPAQIYKKVTSGKLPNAFYRIEDLEAQRLVGKCLANVSKRLPAKELLLDPFLATDQLEFPLPLPIPSTIQHQKSNFRAVDAMENPSTGDQTKSTKMTITGTLNEDDDTVYLKVQISDKNGHVRNIYFPFDIINDTAIAVALEMVKELEIMDLEPFEIAEMIGEEILALVPTWKDWGKSQYNRQHSFAYEDEDDISNHHDHPFFLSASSPSSSQASLPVPQLHQNQTPFAEDWLQDELFMNDDESSSSSMNSFKYVNLNYSDSGYEDEHDQIGAAAEHIYCSPMTTRFCPRQQEIETNFSKKFSNLRLDYCITCHGGCPRLRRMRSSLDVRSQQLQRSLMEQINKRRMFKTVGAIENIGFQHPNGSSCFSR	601

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bva02g00493	601	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	149	161	IPR008271	GO:0004672\|GO:0006468
Bva02g00493	601	MobiDBLite	consensus disorder prediction	432	449	-	-
Bva02g00493	601	Gene3D	Phosphorylase Kinase; domain 1	10	106	-	-
Bva02g00493	601	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED	6	593	-	-
Bva02g00493	601	MobiDBLite	consensus disorder prediction	430	449	-	-
Bva02g00493	601	SMART	serkin_6	25	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Bva02g00493	601	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	6	593	-	-
Bva02g00493	601	Gene3D	Transferase(Phosphotransferase) domain 1	108	289	-	-
Bva02g00493	601	ProSiteProfiles	Protein kinase domain profile.	25	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Bva02g00493	601	Pfam	Protein kinase domain	28	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva02g00493	Bva-Chr2	6311704	6317054	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva02g00493	1	424	MAP Kinase Kinase Kinase	AT3G51630	67.916	0.0	599

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Bva02g00493		Pkinase	2.2e-46	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva02g00493	K08867		-	gmx:100816187	841.647

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva01g00183	01	1490300	1494766	Bva02g00493	02	6311704	6317054	BWGD
	Bva02g00493	02	6311704	6317054	Bva02g00493	02	6311704	6317054	ECH

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