Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00491 ATGGGCAATTACAGGTTCAGATTTTCTGATATGATGCCCAATGCTTGGTTTTACAAGCTCAAGGATATGAGCAAAGGGAAAAACCAAGGCAGTAGAAAGAAGAAGCAGCAATCTTCATCAGTCTCAGCAACAGCAACACAGCCAACATCAAAACCAAAGCAAACCCAACAATGCAATCCTAGAAAATCTTACTACTTTACCAGAGAGCTTACCCCAAGTGATACAATCTACTCCTCACCAGCACCAAACCCAGAAGTTTTTTCTTCAGAAACCCTTTTCCCTGAACCACCCAGAAAATCATCCAAACagaaacccaaaagaaaatctccAAGGTCTTCTTCTCCTAAGCTTGTTAACTCGTCTGTTTCTGCTGGTTGTAATTGTAGAACCACAGTTGAATctgtttggaccaaatcagATTCTCCACCCGAATGTTCATCTTCTCCGTTTGATGATAGCTCCCCAGAACCTGAATTCAGAACAGACCGTGTTCTCGCCTTTGAACCTTTCGATGAAACAGATTTGTCATCTAACTCTTGTGGCTGCAGGCTTAATTCCAATGCTCAAGATATCGTTATCGATGTGGACAAAAAATCTATAGCCAGAAAAGATGATAAGCTTAATGGGTGTGATTCTTTCACAGAGCTTGAACTTCCTCCCATCAAAACCAAACCTGCAAAATTCAATGACCTGCTAATCGATGccaagaaaggagaaaaaccCAGAAgcagaattggaagaaaagaagaaccCAATTTGGAAAAAACCTTGAAAGTTAAGATTGTGAAGGAAGACACAGCATCGATTAAAGAAAACAGAGGTACCCCTGTTGCTGTTAGGAGATTCTCCGTGAGTTCTCCAGGGATTAAGCTTCGGATTCATTCTCCAAGAATTGGATTTGGAAGCAGAAAATTTCAGGGACATGGCCGGAAAAGTGTGTCATCGTCAAGTTCAAGCTCAAGGAGAAGCCTTTCAGGTAGCTTTGCAGTTGTGAAGTCATCTTTTAACCCACAGAGAGATTTCAGAGAATCAATGGTGGAAATGATTGTGGAGAACAACATAAGGGCTTCAAAGGATTTGGAAGATCTTCTTgcttgctttctttctctcaattCAGATGAGTACCATGACATCATTATCCAAGTGTTTAAGCAAATATGGTTCGATTTAACTGATACTCATTA 1184 0.3708 MGNYRFRFSDMMPNAWFYKLKDMSKGKNQGSRKKKQQSSSVSATATQPTSKPKQTQQCNPRKSYYFTRELTPSDTIYSSPAPNPEVFSSETLFPEPPRKSSKQKPKRKSPRSSSPKLVNSSVSAGCNCRTTVESVWTKSDSPPECSSSPFDDSSPEPEFRTDRVLAFEPFDETDLSSNSCGCRLNSNAQDIVIDVDKKSIARKDDKLNGCDSFTELELPPIKTKPAKFNDLLIDAKKGEKPRSRIGRKEEPNLEKTLKVKIVKEDTASIKENRGTPVAVRRFSVSSPGIKLRIHSPRIGFGSRKFQGHGRKSVSSSSSSSRRSLSGSFAVVKSSFNPQRDFRESMVEMIVENNIRASKDLEDLLACFLSLNSDEYHDIIIQVFKQIWFDLTDTH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00491 394 MobiDBLite consensus disorder prediction 308 322 - -
Bva02g00491 394 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 393 - -
Bva02g00491 394 Pfam DNA-binding domain 1 44 IPR025830 GO:0003677
Bva02g00491 394 Pfam Transcriptional repressor, ovate 334 390 IPR006458 -
Bva02g00491 394 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 393 IPR038933 GO:0045892
Bva02g00491 394 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 328 391 IPR006458 -
Bva02g00491 394 MobiDBLite consensus disorder prediction 300 322 - -
Bva02g00491 394 MobiDBLite consensus disorder prediction 24 122 - -
Bva02g00491 394 MobiDBLite consensus disorder prediction 134 154 - -
Bva02g00491 394 ProSiteProfiles OVATE domain profile. 330 389 IPR006458 -
Bva02g00491 394 MobiDBLite consensus disorder prediction 33 86 - -
Bva02g00491 394 MobiDBLite consensus disorder prediction 134 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00491 Bva-Chr2 6296408 6297820 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Bva02g00491 Ovate 1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00491 - - gmx:100794572 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00491 02 6296408 6297820 Bva02g00491 02 6296408 6297820 ECH