Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00478 ATGGCTTtttctagcttcaaatttagCTTCTACTTATTtctagtttttcttcttgggATAGCCTCGGCTCAGCTATCCACTAATTTTTACTCAACATCGTGTCCTAGAGCCATTTCCACCATTAAATCAGCAGTAAACTCTGCTGTTGCCAAAGAGGCTCGCATGGGCGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCCTCAGTTTTATTAGATGACACATCAGGTTTCACAGGGGAGAAGACAGCGTTTCCCAACGCTAATTCTCTAAGAGGTTTTGATGTAATAGATACCATAAAATCTCAAGTGGAGAGCTTGTGCCCTGGTGTTGTCTCTTGTTCTGATATCATAGCCGTTGCTGCTAGGGACTCTGTTGTTGCTCTGGGGGGTCCTAGTTGGCCAGTTCAATTAGGAAGAAGAGATTCAACCACAGCAAGTCTTAGTTCTGCTAACTCAGATTTACCTGGCCCTGGTTCCGATCTCAGTGCCCTCATCACTGCTTTCTCCAACAAAGGTTTCACCGCCAATGAAATGGTTGCCTTATCAGGATCTCACACAATAGGCCAAGCAAGGTGCACAAACTTCAGAACAAGGATTTACAACGAGGCCAACATTAACTCTACCTATGCAACATCATTGCAAGCAAATTGTCCCAACTCAGGTGGTGATGACAATTTGGCTCCTCTTGATACCACGACCCCAAAATTTTTCGACAATGCTTACTTCAAGAACTTGTTGAGCCAAAAGGGTCTCTTGCACTCAGACCAGCAGCTCTTTAATGGAGGATCCACAGACTCTCAAGTGACTACTTACAGCAACAACCTTGTAAGTTTCAAGACAGATTTCGCTAATGCTATGGTTAAAATGAGCAACCTTAGCCCACTCACCGGAACCAGCGGCCAAATCAGGACCAACTGCAGAAAAGTCAACTG 953 0.4313 MAFSSFKFSFYLFLVFLLGIASAQLSTNFYSTSCPRAISTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSGFTGEKTAFPNANSLRGFDVIDTIKSQVESLCPGVVSCSDIIAVAARDSVVALGGPSWPVQLGRRDSTTASLSSANSDLPGPGSDLSALITAFSNKGFTANEMVALSGSHTIGQARCTNFRTRIYNEANINSTYATSLQANCPNSGGDDNLAPLDTTTPKFFDNAYFKNLLSQKGLLHSDQQLFNGGSTDSQVTTYSNNLVSFKTDFANAMVKMSNLSPLTGTSGQIRTNCRKVN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00478 317 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PANTHER PEROXIDASE 17 317 - -
Bva02g00478 317 CDD secretory_peroxidase 24 316 IPR033905 GO:0004601|GO:0042744
Bva02g00478 317 Pfam Peroxidase 42 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Bva02g00478 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Bva02g00478 317 PANTHER PEROXIDASE 72-RELATED 17 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 Gene3D - 28 314 - -
Bva02g00478 317 ProSiteProfiles Plant heme peroxidase family profile. 24 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 SUPERFAMILY Heme-dependent peroxidases 24 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva02g00478 317 Gene3D Peroxidase, domain 2 162 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00478 Bva-Chr2 6216052 6218378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00478 20 317 Peroxidase AT5G05340 66.000 9.83e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00478 K00430 - vvi:100263665 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00170 01 1383251 1385457 Bva02g00478 02 6216052 6218378 BWGD
Bva02g00478 02 6216052 6218378 Bva02g00478 02 6216052 6218378 ECH
Bva02g00478 02 6216052 6218378 Bva12g00415 12 5982503 5986231 ECH
Bva02g00478 02 6216052 6218378 Bva12g02365 12 17958161 17961010 ECH