Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00474 ATGTCTTCTAGGGATCGGAAAAAAGCAGCTCTACAACACAAGTTGCAACAACTTCGAGCTGTCACAAACTCTAGTGCTCTCAACAGAGCCTCAATCATTGTCGATGCCTCTAAACATATCGAGGAGTTGAAGCATAAAGTTGAAGGAGTAAACACAGAGCTTGAAAACACtgaatcttcttcttcccaaTTACCTATGGTATCCGTTGAAACCCTAGAGAGGGGTTTTCTCATTAACGTGTTTTCAGAGAGGAACTGCCCGGGTATGCTCGTCGCTATACTTGAAGCCTTTGAGGAACTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTAGAAGCTGTGGGAGGAGAAAGTGAAGATAACGAAAGCATAGATGCTCAAGTGGTGAAGCAAACTGTTCTGCAAGCAATCAGGAATATCGAGTA 443 0.4221 MSSRDRKKAALQHKLQQLRAVTNSSALNRASIIVDASKHIEELKHKVEGVNTELENTESSSSQLPMVSVETLERGFLINVFSERNCPGMLVAILEAFEELGLDVLDARVSCEDTFQLEAVGGESEDNESIDAQVVKQTVLQAIRNIE 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00474 147 ProSiteProfiles ACT domain profile. 78 147 IPR002912 -
Bva02g00474 147 CDD ACT_UUR-ACR-like 87 143 - -
Bva02g00474 147 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 146 - -
Bva02g00474 147 Coils Coil 33 60 - -
Bva02g00474 147 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00474 Bva-Chr2 6192749 6194466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00474 1 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 25.773 1.30e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00474 - - aip:107628501 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00474 02 6192749 6194466 Bva12g01780 12 14654780 14658939 ECH
Bva02g00474 02 6192749 6194466 Bva12g01412 12 12369604 12371461 ECH
Bva02g00474 02 6192749 6194466 Bva02g00474 02 6192749 6194466 ECH