Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00442 ATGGATGATAATAATACCTGGGGAACTGCTGCTtctgaatttaaaaatgaagtgtCTAAATTTAAACCAATTCCACCTCCTTCATTGCCCTTGTCTCCTTCCCCAATTTCCCCTTCTTCTTATCTGAGTTTCTCTTCTGGTTTAAGCCCATCTGATTTCTTAAACTCCtccttgtttctttcttctccacatATTATTGCATCTCCCACAACTGAGGGGTTTGCTGGACAGAGCTTTGACTGGAGAAACAGTTCTAGTGGGAACCAAGAACGGAACaaggaggaagaggaaaattattctgatttttcttttcaaacccAAACAAAGCCTGCATCTTCATCCCTTTTCCAGTCTTCTTCAAGCATGTTTCAACAAGCGCAGGAACCTCTAAAGAATCAAGATACGTGGAAATTTAATGAACCACCAAAGCAAACTGATATTTCATCAGCAACAAAATCTGAATACCCATCAACTCAGGGCTTCTCCTCCGAAATGGATGCAAACAAATCAACAGTGCAAAGTCATTCTGCTCCTGGGTCTGGTTATTTTAACTACAATAATTCGTCCCAGTCCATCAGAGAGCAAAGGAGAGCCGAAGACGGGTATAATTGGAGGAAGTATGGACAGAAACAAGTCAAAGGAAGCGAAAATCCACGCAGTTATTATAAGTGCACACATCCAAGTTGttcaatgaagaagaaggTTGAGAGGTCTTTGGATGGACAAATTACTGAAATAGTATACAAGGGAAGTCATAACCATCCCAAGCCCCAGTCTACTAGGAGATCAAGTTCTCAATCAATCCAGCCTTCTTCTTCGTGCACCAACTCGGGGATTTCCGACCAATCAGTTGTGACACTTGGTAATCAAATGGAGCCTGTCTCAGTTCACGAAGACTCTTCGGCCTCTGTTGGAGAAGATGACTATGAGCAAACATCTCAAACCAGCTATTCTGGTGGAGATGAAAATGACTTTGGACCTGATGCCAAAAGATGGAAAGGAGACTATGAAAATGATGGTTATTGCATCTCTGGGAGTAGAACCGTCAAGGAACCTAGAGTTGTAGTTCAAACTACAAGTGAACTTGATATACTTGATGATGGCTATAGATGGAGAAAATATGGACAAAAAGTAGTCAAAGGAAATCCAAACCCAAGGAGCTACTACAAATGCACCTCCCCAGGTTGTTCAGTGAGAAAACACGTCGAGCGAGCTGCACATGACCTCAAAGCTGTGATCACAACTTATGAAGGTAAACACAACCATGATGTTCCTGCAGCACGTGGCAGCGCAAGTTATAACCTTAACAGAACCTCATTGAATGACAACACTAACAGTGCACCTGCACCTATAAGGCCCTCAGCAGTTAACAGTTATTCTAGCTCATCAAGTTTCTCAAATTCGCATTACAATGCAAGACCGCCAACTTCTCAAAGTCAAGAACCATTTCAACTGCAGATGCTGCAGAACCATGGAACACTTGGATATTCAGCTCTTGGGAGATCAATTGGCTCATTTACCAATCAAACACAATTTTCTGGCAATGCATCTTCTAAGGCGAAGGATGACACAGTTCTTCAGTCACTTCTGTCCAAGAACTTCTA 1604 0.3984 MDDNNTWGTAASEFKNEVSKFKPIPPPSLPLSPSPISPSSYLSFSSGLSPSDFLNSSLFLSSPHIIASPTTEGFAGQSFDWRNSSSGNQERNKEEEENYSDFSFQTQTKPASSSLFQSSSSMFQQAEPLKNQDTWKFNEPPKQTDISSATKSEYPSTQGFSSEMDANKSTVQSHSAPGSGYFNYNNSSQSIREQRRAEDGYNWRKYGQKQVKGSENPRSYYKCTHPSCSMKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSSQSIQPSSSCTNSGISDQSVVTLGNQMEPVSVHEDSSASVGEDDYEQTSQTSYSGGDENDFGPDAKRWKGDYENDGYCISGSRTVKEPRVVVQTTSELDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSPGCSVRKHVERAAHDLKAVITTYEGKHNHDVPAARGSASYNLNRTSLNDNTNSAPAPIRPSAVNSYSSSSSFSNSHYNARPPTSQSQEPFQLQMLQNHGTLGYSALGRSIGSFTNQTQFSGNASSKAKDDTVLQSLLSKNF 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00442 533 MobiDBLite consensus disorder prediction 433 478 - -
Bva02g00442 533 Gene3D WRKY domain 183 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 SMART WRKY_cls 197 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 SMART WRKY_cls 364 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 ProSiteProfiles WRKY domain profile. 192 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 MobiDBLite consensus disorder prediction 16 44 - -
Bva02g00442 533 MobiDBLite consensus disorder prediction 71 330 - -
Bva02g00442 533 SUPERFAMILY WRKY DNA-binding domain 193 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 MobiDBLite consensus disorder prediction 252 296 - -
Bva02g00442 533 Gene3D WRKY domain 351 417 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 SUPERFAMILY WRKY DNA-binding domain 356 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 MobiDBLite consensus disorder prediction 305 320 - -
Bva02g00442 533 Pfam WRKY DNA -binding domain 365 421 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 Pfam WRKY DNA -binding domain 198 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 506 IPR044810 GO:0003700
Bva02g00442 533 ProSiteProfiles WRKY domain profile. 359 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g00442 533 MobiDBLite consensus disorder prediction 71 86 - -
Bva02g00442 533 MobiDBLite consensus disorder prediction 101 191 - -
Bva02g00442 533 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 27 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00442 Bva-Chr2 5951866 5954650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00442 17 522 WRKY Transcription Factor Family AT2G38470 44.981 1.56e-112 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva02g00442 WRKY 9.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00442 K13424 - gmx:100792833 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00138 01 1043432 1046747 Bva02g00442 02 5951866 5954650 BWGD
Bva02g00442 02 5951866 5954650 Bva02g00442 02 5951866 5954650 ECH