Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00437 ATGGGAGCTTGTTGCAGTCACCATATTAGGCGTCGCCGCAATTCAGAAagcgacttggatgattatgaGCGTGAAGAAGACAATGTTGTCTCATTTGGAGATTTTGGAGCTCGAGTCAGGTTAAGAGGATTCTCTGGGTTTGTATCAATGTATTCCCAACAAGGACAAAAGGGAGTCAATCAAGATACAATGACTGTTTGGGAGGACTTCACCGGAGAAGGAGATATGATCTTTTGTGGTGTGTTTGATGGTCATGGTCCTCTTGGGCACAGAATTGGACAATACGTACGCGATGTTCTACCCTCAAAACTGTCTGAAACAATCAAAATGGCGCAACAGAAGGTCGACAAATACAATGATGTCTCAGATAATAATGAAGACAATGAACACAAGTCCCTTGCTTTATGGGAGAGCTGCTTCCACAAGTCCTTCGATGAAACAGATGAGGATATTGCTAGGGACATCAATATTGACTGCTTTTGCAGTGGTAGCACTGCTGTAACTGTAATCAAACAGAGAGATCAGCTGATAATTGGCAACTTGGGTGATTCTCGTGCAGTCCTTTGCACAAGAGGAGACAAAGACAACCTTATTCCTGTTCAACTCACTGTTGACTTGAAACCAAATCTTCCAAGAGAAGCTTCGAGAATCTTTAGTTGTGAAGGCAGAGTTTTTGCAGCAGAAGAAGAACCAGATGTTTACAGAATATGGATGGCTGATGATGACTGCCCTGGACTGGCTATGTCAAGAGCCTTCGGCGATTTTTGCCTGAAAGATTATGGCCTCATCTCAACTCCTGATGTCTTCTATAGAAAGCTAACCCAGAAAGATGAATTCGTGGTTTTGGCAACTGATGGGATATGGGATGTACTGAACAACACTGAAGTAATAAACATAGTTGCTTCAGCACCAAAGAGGTCCATAGCTGCGAAAATGTTAGTAAAGCATGCTGTTCGGGCATGGGCATGTAAATATCCCAATGCCAGGGTTGATGATTGTGCCGTCGTATGCTTGTTCCTGAAAGATGAGCCTCATGTTGATTCAACAGCTGGGAATCAAAGAGGTGAAAAGAAGAACCATTCTCATGGTGATGAAGACATTGAAAGTGGCGAGATCACCCCAGATGCAGTGGAAGAATGGCAAGCTATGGAAGGGTTAACAAGAGCCAACTCTGTCTCGAAAATTCCGCGGCTAGCGAGGGATATGAGCAGAAGGAATTCGACCAGGCACCATGAAGGTGCTCGGATTTACTA 1253 0.4334 MGACCSHHIRRRRNSESDLDDYEREEDNVVSFGDFGARVRLRGFSGFVSMYSQQGQKGVNQDTMTVWEDFTGEGDMIFCGVFDGHGPLGHRIGQYVRDVLPSKLSETIKMAQQKVDKYNDVSDNNEDNEHKSLALWESCFHKSFDETDEDIARDINIDCFCSGSTAVTVIKQRDQLIIGNLGDSRAVLCTRGDKDNLIPVQLTVDLKPNLPREASRIFSCEGRVFAAEEEPDVYRIWMADDDCPGLAMSRAFGDFCLKDYGLISTPDVFYRKLTQKDEFVVLATDGIWDVLNNTEVINIVASAPKRSIAAKMLVKHAVRAWACKYPNARVDDCAVVCLFLKDEPHVDSTAGNQRGEKKNHSHGDEDIESGEITPDAVEEWQAMEGLTRANSVSKIPRLARDMSRRNSTRHHEGARIY 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00437 417 ProSiteProfiles PPM-type phosphatase domain profile. 47 340 IPR001932 -
Bva02g00437 417 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 395 - -
Bva02g00437 417 MobiDBLite consensus disorder prediction 397 417 - -
Bva02g00437 417 SUPERFAMILY PP2C-like 44 342 IPR036457 -
Bva02g00437 417 MobiDBLite consensus disorder prediction 348 371 - -
Bva02g00437 417 MobiDBLite consensus disorder prediction 398 417 - -
Bva02g00437 417 MobiDBLite consensus disorder prediction 348 369 - -
Bva02g00437 417 CDD PP2Cc 47 340 IPR001932 -
Bva02g00437 417 PANTHER ALPHABET, ISOFORM E-RELATED 1 395 - -
Bva02g00437 417 SMART PP2C_4 38 338 IPR001932 -
Bva02g00437 417 Pfam Protein phosphatase 2C 72 324 IPR001932 -
Bva02g00437 417 Gene3D - 45 343 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00437 Bva-Chr2 5929770 5932409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00437 1 345 PP2C-type Phosphatase Gene Family AT5G01700 53.582 1.23e-125 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00437 - - mtr:MTR_7g070510 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00135 01 1021552 1026609 Bva02g00437 02 5929770 5932409 BWGD
Bva02g00437 02 5929770 5932409 Bva02g00437 02 5929770 5932409 ECH