Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00424 ATGGGAACCAATAATCGGAGTTTCAATGATtctcccacaaacccatctcAATTTCTGCAAAAAGTTGCTACCTTTAGCTCTATCTCTAATTTCTGGTTTAGGAACAATGTCTTCTTCTTGGCCTGGTTCCTATTTCTTCAAGCTGTCTCAGGCCATTCGTGGGATGGGATAGCTATTGCTCGAACCGATCATCAGGCTTTAGGAGCGATTAAGAATGAACTGATTGACTTCAATGGAGTTCTGAGGAGCTGGAATGGCAGTTTCATTGCAGCTTGTTCTGGTGGGTGGGCAGGAATCAAGTGTGTGAATGGTCAGGTTATTGCGATACAGCTTCCATGGAAGGGATTGGGTGGAAGAATCTCAGAGAAAATTGGGCAACTTCAAGCTCTTAGGAAGCTCAGCCTTCATGACAATGTTCTTGCAGGTCCTATCCCTTCATCACTTGGCTTCCTTACCAATCTCAGAGGGGTTTATCTCTTCAACAATAGGCTTTCAGGTTCTATTCCTCCTTCTCTTGGAAATTGCCCTGTGCTTCAGTCTTTGGATGTTAGCAGTAATTTAATTACTGGTAAAATCCCACCCAGTTTAGCAAACTCCACTAGAATATTTAGACTCAATTTGAGCTTCAATTCACTTTCTGGGTCCATTCCTAGTAGTTTCACTCTATCTCAATCTCTTACCATTCTTGCTCTCCAACAAAATAACCTATCAGGTTCTATCCCAGATTCATGGGGTGGAGATGGaatgaagaacaaaaatttccaTCTTCAGTTCTTGACCCTTGATCATAATGCCATTTCTGGTACCATTCCAGTTTCTCTAAGTAAGCTGGGTTTCCTTGAACAAATTTCACTGAGTCATAATCAGATTGTAGGGTTTATTCCAAGTGAATTAGGATCACTTTCAAGCCTTCAAATTCTTGATCTATCATATAATAACATCAGTGGAAGCTTTCCTCCTAGCTTTTCTaatctctcttctcttgtttctttGAACCTAGAAAGcaataaacttgaaaaatatatccCAGATACCTTGGACAGGTTGCAAAATCTTTCTGTGCTTAACCTGAAGAACAATGAGATTAATGGCCAAATCCCATCAACAGTTGGAAGCATCTCAGGCATTACCCAACTTGATTTTTCTGAAAACAAATTTGTGGGTGAAATTCCAGGGTCCCTAACCAAACTTGCAAATCTCACTTTCTTCAATGTTTCTCAGAACAATCTTTCTGGTCCTGTTCCTTCTATCCTTgccaaaaaattcaattcaagctCTTTCACTGGGAATCTTCAGCTATGTGGGTATAGCACTTCAAAACCATGCCCTTCATCTCAGCCTCATAATGTTTCAGTTCCATCACCAGAGTCTCCTTTGAAGCCACAACATCACCGTAGATTAAGTACAAAAGACATAATCCTCATAGCAGCAGGTCTCCTCCTCTTCATTCTGCTTCTGCTATGCTGCATTTTGCTATGTTGTTTGATCAGAAAAAGAGTAGcttcaaaaggaaagaatggaAAAACTGATAAGGCGGCTGCTGCTAGAAGTGTTGAAAAAGGTGCTCCAACTGCTGCTGAAGTTGAATCAGGAGGTGAAGCTGGTGGGAAACTAGTTCATTTTGATGGGTCATTTGTATTTACAGCAGATGATCTTTTGTGTGCCACGGCAGAAATAATGGGGAAAAGTGCATATGGAACAGCATACAAGGCAACATTGGAAGATGGGAACCAAGTTGCTGTTAAAAGATTGAGGGAGAAGACTACTAAGGGGCAGAAAGAGTTTGAAACTGAGGTTGCTTCCCTTGGCAAAATTAGACACCCAAATCTCCTAGCCCTGAGAGCTTACTACTTAGGACCGAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGACCAAAGGAAGCCTTGCTTCCTTCCTTCATGCTCGCGGACCGGAAATTGTCATTGACTGGCCAACAAGGATGAAAATTGCAATTGGAGCCACTCATGGTCTTAACTACCTCCATAGCCAAGAGAATATAGTTCATGGGAATCTCACCTCCAGCAATATACTGTTGGATGAGCAGACAAATGCCCATATCACAGATTTTGGTCTTGCAAGGCTAATGACCACTTCTGCAAACACAAACATCATAGCCACTGCAGGAAGTCTTGGCTATAATGCACCAGAGCTCTCAAAGACCAAGAAGCCGAACACAAAGACTGATGTGTATAGCCTTGGTGTTATCATTTTGGAACTCTTAACTGGAAAACCACCGGGTGAACCAATCAATGGCATGGATTTGCCACAATGGGTGGCTTCTATAGTGAAGGAAGAATGGACAAATGAAGTGTTTGATTTGGAGCTTATGAAGGATGCACCAGCTATAAGTGATGAACTGCTTAATACATTGAAATTGGCTCTGCATTGTGTTGATCCATCTCCAACAGCAAGGCCAGAAGTTCAACAGGTTCTGCAACAATTGGAAGAGATCAAGCCAGACTTGGCACCCACTTCAACAGATGAGGGAGCCAAAGTTCCAGCAGCAGAATA 2534 0.4021 MGTNNRSFNDSPTNPSQFLQKVATFSSISNFWFRNNVFFLAWFLFLQAVSGHSWDGIAIARTDHQALGAIKNELIDFNGVLRSWNGSFIAACSGGWAGIKCVNGQVIAIQLPWKGLGGRISEKIGQLQALRKLSLHDNVLAGPIPSSLGFLTNLRGVYLFNNRLSGSIPPSLGNCPVLQSLDVSSNLITGKIPPSLANSTRIFRLNLSFNSLSGSIPSSFTLSQSLTILALQQNNLSGSIPDSWGGDGMKNKNFHLQFLTLDHNAISGTIPVSLSKLGFLEQISLSHNQIVGFIPSELGSLSSLQILDLSYNNISGSFPPSFSNLSSLVSLNLESNKLEKYIPDTLDRLQNLSVLNLKNNEINGQIPSTVGSISGITQLDFSENKFVGEIPGSLTKLANLTFFNVSQNNLSGPVPSILAKKFNSSSFTGNLQLCGYSTSKPCPSSQPHNVSVPSPESPLKPQHHRRLSTKDIILIAAGLLLFILLLLCCILLCCLIRKRVASKGKNGKTDKAAAARSVEKGAPTAAEVESGGEAGGKLVHFDGSFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIDWPTRMKIAIGATHGLNYLHSQENIVHGNLTSSNILLDEQTNAHITDFGLARLMTTSANTNIIATAGSLGYNAPELSKTKKPNTKTDVYSLGVIILELLTGKPPGEPINGMDLPQWVASIVKEEWTNEVFDLELMKDAPAISDELLNTLKLALHCVDPSPTARPEVQQVLQQLEEIKPDLAPTSTDEGAKVPAAE 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00424 844 MobiDBLite consensus disorder prediction 825 844 - -
Bva02g00424 844 Pfam Leucine rich repeat 303 362 IPR001611 GO:0005515
Bva02g00424 844 MobiDBLite consensus disorder prediction 507 529 - -
Bva02g00424 844 SMART LRR_typ_2 325 348 IPR003591 -
Bva02g00424 844 SMART LRR_typ_2 277 300 IPR003591 -
Bva02g00424 844 SMART LRR_typ_2 151 175 IPR003591 -
Bva02g00424 844 SMART LRR_typ_2 397 420 IPR003591 -
Bva02g00424 844 SMART LRR_typ_2 301 324 IPR003591 -
Bva02g00424 844 SMART LRR_typ_2 349 373 IPR003591 -
Bva02g00424 844 ProSiteProfiles Protein kinase domain profile. 554 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00424 844 Pfam Leucine Rich repeat 175 191 IPR001611 GO:0005515
Bva02g00424 844 Pfam Leucine rich repeat N-terminal domain 62 101 IPR013210 -
Bva02g00424 844 SUPERFAMILY Protein kinase-like (PK-like) 558 829 IPR011009 -
Bva02g00424 844 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 45 829 - -
Bva02g00424 844 Pfam Protein tyrosine and serine/threonine kinase 558 822 IPR001245 GO:0004672|GO:0006468
Bva02g00424 844 Gene3D Ribonuclease Inhibitor 317 443 IPR032675 -
Bva02g00424 844 Gene3D Ribonuclease Inhibitor 222 316 IPR032675 -
Bva02g00424 844 Gene3D Ribonuclease Inhibitor 60 221 IPR032675 -
Bva02g00424 844 Gene3D Phosphorylase Kinase; domain 1 560 631 - -
Bva02g00424 844 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 45 829 - -
Bva02g00424 844 CDD STKc_IRAK 560 825 - -
Bva02g00424 844 SUPERFAMILY L domain-like 97 453 - -
Bva02g00424 844 Gene3D Transferase(Phosphotransferase) domain 1 632 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00424 Bva-Chr2 5851633 5854617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00424 52 827 Receptor kinase-like Gene Family AT3G51740 69.923 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva02g00424 PK_Tyr_Ser-Thr 6.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00424 - - gmx:100799290 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00424 02 5851633 5854617 Bva02g00424 02 5851633 5854617 ECH