Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00417 atggctgagaaagagaagaaagggtGCATCAAAGCAAGTAAAGGGCCTTGGATAGTTCACGGCACCAACAAAGATGGCAGTTTCGCTACACGGTACCGGTACCCGACCGAGAGAGAGAGGCAGAATAATAAACAAAGGGAGCGAACCCGGAGGGCAGTGACACGCAACATATTTGCCGGCCTCCGGAAACATGGAAACTACCATCTTCCGAAGCATGCCAACACGAATGACTTGCTCATAGCACTATGTGCAGAAGCTGGGTGGCATGTTGAAGCAGACGGCACCGTTTTTAGAAAGGGAAGTGCATTGGAAGAATCTCACATGATCAACAAGAGCTCTATTAATATTGACATGGAAGATGATGCCTATTGTCGGTGCATCAATGAAAACACATCTATCTA 401 0.4439 MAEKEKKGCIKASKGPWIVHGTNKDGSFATRYRYPTERERQNNKQRERTRRAVTRNIFAGLRKHGNYHLPKHANTNDLLIALCAEAGWHVEADGTVFRKGSALEESHMINKSSINIDMEDDAYCRCINENTSI 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00417 133 Pfam BES1/BZR1 plant transcription factor, N-terminal 32 108 IPR008540 -
Bva02g00417 133 PANTHER BETA-AMYLASE 8-LIKE 11 120 - -
Bva02g00417 133 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 11 120 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00417 Bva-Chr2 5806977 5807652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00417 26 123 BZR Transcription Factor Family AT3G50750 52.041 8.55e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Bva02g00417 BES1_N 2.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00417 - - vvi:104880015 155.992