Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00412 ATGGCTGCCACTGAAGCCACTCCCAAATTTCGGACCGAGTTTCACCCGGAACTCTCGGTTTCTGGTCCGACCCATGACGGGCTCCATTTCTGGCAATACATGATTGCAGGTTCCATAGCAGGCTTAGTGGAGCACATGGCCATGTTCCCGGTGGATACACTCAAGACCCGGATGCAAGTTCTGAGTGGCTCGTGCTCGGTTCAACCAATCGGAGTCCGGCAAGCCCTGGGTTCAATTTTGAAACTTGAGGGTGCAGCTGGGCTCTATCGCGGAATCGGAGCAATGGGTCTAGGAGCGGGTCCTGCACATGCTGTGTACTTTTCGGTTTACGAGTTTTGCAAAGAGGCACTCTCGGGTGGGGATCCGAATAACTCGGCTGCTCACGCCGTTTCTGGGGTCTGCGCCACCCTGACAAGCGACGCCGTTTTCACACCGATGGATATGGTGAAGCAGAGGTTGCAGTTGAAGGGTAGTCCGTACAGGGGGGTGGTGGATTGTGTGAGGAGGGTGTTGATGGAAGAGGGGATGGGAGCCTTTTATGCTTCTTATCGGACTACGGTAGTGATGAATGCGCCGTTCACGGCGGTTCAGTTTGCTACCTACGAGGCAGTGAAGAGGGCGCTGATGGAGGTGTCGCCGGAGAGTGCAGAGGAGGAAAGGTTGGTCGTTCATGCCACGGCTGGTGCTGCTGCTGGGGCCTTGGCTGCTGCTGTCACAACTCCACTTGATGTTGTCAAAACTCAACTACAATGCCAGGGTGTGTGCGGATGTGACAAATTCTCAAGCAGTTCTACTGGGCATGTGATTCAAACAGTGATTAGGAAAGATGGATATAGGGGACTTATGAGAGGATATGTGCCTAGAGTGCTCTTCCACGCACCTGCTGCTGCAATTTGCTGGTCTACTTACGAAGCAtcaaaatctttctttcaGAAATTCAGTGGCAGCTG 950 0.5284 MAATEATPKFRTEFHPELSVSGPTHDGLHFWQYMIAGSIAGLVEHMAMFPVDTLKTRMQVLSGSCSVQPIGVRQALGSILKLEGAAGLYRGIGAMGLGAGPAHAVYFSVYEFCKEALSGGDPNNSAAHAVSGVCATLTSDAVFTPMDMVKQRLQLKGSPYRGVVDCVRRVLMEEGMGAFYASYRTTVVMNAPFTAVQFATYEAVKRALMEVSPESAEEERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDKFSSSSTGHVIQTVIRKDGYRGLMRGYVPRVLFHAPAAAICWSTYEASKSFFQKFSGS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00412 316 Gene3D Mitochondrial carrier domain 6 212 IPR023395 -
Bva02g00412 316 Gene3D Mitochondrial carrier domain 213 316 IPR023395 -
Bva02g00412 316 PANTHER MITOFERRIN-1-RELATED 3 314 - -
Bva02g00412 316 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Bva02g00412 316 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Bva02g00412 316 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Bva02g00412 316 PRINTS Mitochondrial carrier protein signature 33 46 IPR002067 GO:0055085
Bva02g00412 316 PRINTS Mitochondrial carrier protein signature 46 60 IPR002067 GO:0055085
Bva02g00412 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 116 IPR018108 -
Bva02g00412 316 PANTHER MITOFERRIN-LIKE 3 314 - -
Bva02g00412 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 309 IPR018108 -
Bva02g00412 316 Pfam Mitochondrial carrier protein 220 312 IPR018108 -
Bva02g00412 316 Pfam Mitochondrial carrier protein 124 210 IPR018108 -
Bva02g00412 316 Pfam Mitochondrial carrier protein 28 118 IPR018108 -
Bva02g00412 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 207 IPR018108 -
Bva02g00412 316 SUPERFAMILY Mitochondrial carrier 26 304 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00412 Bva-Chr2 5780241 5781857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00412 3 314 Chloroplast and Mitochondria Gene Families AT1G07030 68.923 1.12e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00412 K15113 - jre:108982304 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00412 02 5780241 5781857 Bva02g00412 02 5780241 5781857 ECH