Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00401 atggGATATCTCATTTCTGCTGCCCTAGTGACCTTCTTTGCTTtgattatatcaaaaatttgGCAAATCTTTATGACTGTGTTATGGAGGCCATATGCCCTAACTCGGTACTTCCGTAAGCAGGGAATCACGGGGCCACCATACTCCCTTTTTTCAGGTTCTCTTCCCGAAATcagaagaacaaagaaagaggccaGAGGAATGGTTATGGATACTTACTCAAATGATATTGCTCCAAGGGTTCTTCCATACTACCATACATGGTCCTCATTATATGGGAAGACATTTCTGTACTGGTTTGGAACAACCCCAAGGGTATTCATTTCTGACCCGGAGCTGGCCAAACAGGTTCTATCAAACAAGTCTGGTTTCTACCGAAAACCAGAAACAGTGTCTTCAACAAAAGCTCTGATAGGGGAAGAAGGATTAATTCTCAGAGATGGATTAGAATGGGCTAAGCACAGAAGGATACTCAATCCTGCTTTCTCTATGGACAAACTGAAGgttatgataaaaagaatggCAGCGTGTACCATTTCCATGCTTGATGAGTGGGAAAGAGAGGCCAGTGAAGCCAAATATAAGAAGATACAGATGGATGAGGAATTCCGGGAGCTGACAGCAGATATAATAGCCCACACTGCTTTTGGTAGTAGCTTTGTCCAAGGAAGGGAGGCCTTTAATGCACAAAGAGAACTTCTAAAGCAGTCTGCAACTTTGAATGCTTATGTTTTCATTCCCGGAAGCCAATATCTTCCCACTCCATCAAATCTTAAGACATGGAAGCTTGAGAGGAAAATTAGGAAATCATTAAAGCAAATTATAGAAAGTAGATTACATTACCTATCTACCAAAGACGAGATAGATTGGTCTTACGGAGATGATCTGTTAGGCGTGATGATTGAAGCTGCTCCTAAGTGGAATATGAAGGAAATCTTGGATGAGTGCAAGACTTTCTTCGTTGCTGGCCATGAAACCACTTCAAACTGGCTAACTTGGACAGTATTCTTGTTGAGTGTACATAGTGAATGGCAAGAGAAACTCAGAGAAGAGGTATTGCAGAACTGTGGCATGGAAATTCCTAATGCAGATATGCTGTCCAAGTTAAAACTGttgaATATGGTATTGATGGAAGCATTGAGATTGTATGGCCCGGCTCTAACGCTATTAAGAGAGACATCTCAAGACATCAAACTGGGGAACTTGTCAATCCCCAAAAATACAGGTATCACAATTGCAGTTGCAATGATTCATTGGAGCACCGAATACTGGGGTGAAGATGCAAATACGTTCAACCCACTCAGATTCATTGATGGAGTTTCCAAAGCTGCCAAACACCCTAATGCTCTACTTGCCTTTTCGACTGGTCCAAGAGTATGTATTGGTCAGAATTTTGCTATGTTAGAAGCAAAGACAGTGATGACTTTGATTCTCCAAAGGTTCTCTTTGTCCCTTTCCTCCAACTACCAACATGCACCAGTAGAAAACCTTACTTTGCAGCCACAATATGGGCTTCCCATCATTGTAAAACCTTTGCATGTGTA 1544 0.4022 MGYLISAALVTFFALIISKIWQIFMTVLWRPYALTRYFRKQGITGPPYSLFSGSLPEIRRTKKEARGMVMDTYSNDIAPRVLPYYHTWSSLYGKTFLYWFGTTPRVFISDPELAKQVLSNKSGFYRKPETVSSTKALIGEEGLILRDGLEWAKHRRILNPAFSMDKLKVMIKRMAACTISMLDEWEREASEAKYKKIQMDEEFRELTADIIAHTAFGSSFVQGREAFNAQRELLKQSATLNAYVFIPGSQYLPTPSNLKTWKLERKIRKSLKQIIESRLHYLSTKDEIDWSYGDDLLGVMIEAAPKWNMKEILDECKTFFVAGHETTSNWLTWTVFLLSVHSEWQEKLREEVLQNCGMEIPNADMLSKLKLLNMVLMEALRLYGPALTLLRETSQDIKLGNLSIPKNTGITIAVAMIHWSTEYWGEDANTFNPLRFIDGVSKAAKHPNALLAFSTGPRVCIGQNFAMLEAKTVMTLILQRFSLSLSSNYQHAPVENLTLQPQYGLPIIVKPLHV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00401 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 Coils Coil 182 202 - -
Bva02g00401 514 Pfam Cytochrome P450 89 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Bva02g00401 514 PANTHER P450, PUTATIVE-RELATED 9 509 - -
Bva02g00401 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 509 - -
Bva02g00401 514 SUPERFAMILY Cytochrome P450 78 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 Gene3D Cytochrome P450 30 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00401 514 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00401 Bva-Chr2 5681049 5683178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00401 21 512 Cytochrome P450 AT2G46960 54.167 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00401 K20660 - aprc:113872106 717.613