Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00397 ATGGAGCCTCGTGTTTCTGATTTTGGTGTTGCCATACATATTGCTCAATCTTCTTCTCCAATGCATACTCTTCGTTCAAGTTATATTGCTGGCACAGTTGGCTATATGGCACCGGAAAATGCATATACAATTGTGCAGAGTGGGAAGTCTGACGTATATAGTTATGGAGTGGTTTTGCTTGAGCTAATAACAAGGAAGATGGTATTAGATCCCTCATTTAATGATCAAACCACACTGATTGGGTGGGTTAGATCTGTCTGGGAAGAAACACCACATATTGAAAAGATTGTTGATCCAAGCCTTGTAATGAAGGCAAATCTGCAGGATATGAAACCAAGGTCACCAAACTTAATTAGTTTTGAGATAAAGCGCACATGTTTGAGTGTTATAGAATCAAAGTATGCTGCATTCTTCATGGAGCTTGAAGTGATCAATCATGCTAGACTTCTTGTGTTTAAGAAGCCTCCATTTTCCTTCTCCTATGGTGAATTGCAAGCTGCAGGAGCAGCAGTACCTTTATA 521 0.3973 MEPRVSDFGVAIHIAQSSSPMHTLRSSYIAGTVGYMAPENAYTIVQSGKSDVYSYGVVLLELITRKMVLDPSFNDQTTLIGWVRSVWEETPHIEKIVDPSLVMKANLQDMKPRSPNLISFEIKRTCLSVIESKYAAFFMELEVINHARLLVFKKPPFSFSYGELQAAGAAVPL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00397 173 Pfam Protein kinase domain 4 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00397 173 PANTHER OS08G0446200 PROTEIN 1 105 - -
Bva02g00397 173 Gene3D Transferase(Phosphotransferase) domain 1 1 134 - -
Bva02g00397 173 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 105 - -
Bva02g00397 173 SUPERFAMILY Protein kinase-like (PK-like) 2 93 IPR011009 -
Bva02g00397 173 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00397 Bva-Chr2 5646431 5650391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00397 1 102 Receptor kinase-like Gene Family AT1G17750 49.057 3.93e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva02g00397 Pkinase 5.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00397 - - ini:109187519 131.724