Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00388 ATGATGCAGCCTGAGATTCTTCAAGATTCATGGTCAATCTATGTAGAAGTGAGCtcaattttttatcagattGAGAGctttaacttcaattttaatacCCAGGTGAATGATTGTAATTTCAGTTCTCTTTACAGCAGACCAGAGGAAACTTATGAAGTTTCCACCATCCCCAGTCCTTCTATCATGTTTTCCAATGACTTCATCGAATACCCAGTTGATAATTTTGCCCAGCAACTCCCATCACTAATGGATGATTTTTCCATGGATTTGGGTCAAATCTTTGATACCCAGATTGTGGGGATTCATGGATACCCAGAAGAAAATGAGGGAAGCTTTCATTCCCAACATTTCTCTTCTGAAATTGCAGATTCCTGGAGTCCAACCCCATCCACGAAGTCAGACTCGTCTGCAGTACACCCATCATTGACCTTGCCACATGAAGACATGGAAATAGACAACCAATTGGCAATTCCAATTTTAGTGGAGGCCCTTGCAGAAGCCATGGAAGAGGAACATAACCCACTAGcagaagaaattttcaaacGCCTGAGCCAGAAAGTTGGCCCACTTGGTAACACTCAGGAGCGTGTCGCATTCAACTTGTGCAAAGACATAACTTGCAACGCTCAGGAAGATTATCTCAGAAAGGAGGCCTGCAAGAACATGAAGCCAGCATTTCAAACATTCTACCAATGGTTCCCACAAGGCAAAGTTGCTCACTTTGCAGCAAATTCAAGAATTCTTGAATCTATACCAGAAGATTCAGATGAAATACACATAGTGGACTTTGACATGGGAGAAGGGGTTCAATGGGCTCTTATGATCGAGACCATTGCACAAAAACAACACAGAACAttgaaaattacatcaatcaaatGGGAAGATGAGATCCCAGAGTGTGTTTTTGCTCAGTGGAAGTTCAAGGACACCAAAAATAAGCTCTTTGCACATGCCAAATCCTGTGGCCTACAGCTAAAAGTGGAGGAGAAAGGAATTGAAGATTTGGTTATAGAGTTGAAAAAGATGAACAAAAGGGGAGGAAGTGGAAAGCGGGAATGGTTAGCCTTTAATTGCATGGTGGGTCTTCCTCATATGGGGAGGCCAAGAAGTAGAAGGTATGCCATGGAATTTCTTAGGGTGGCCAAGGATTTGATACGCAGCCATGGAAACAATGGTATTATCACTTTTGGTGATGGAGATGCCATTGAGAAACTCAAGAACTGCTTGAATTTCAAGtcattttttaaaggaaatttaGTGCACTACGAAGCTTTATTGGAGTCAATCGAAGCAAATTTCCCGAAGGAACTCTCAGAAGCAAGAATTGCTGTCTTTGTGGCACCTTATGTGTCTTCTCTTGTTTGGTTGCGGAAATGGGAGGAGGTTGGGGAAAATTGTCATCTCCAAGGGGGAATTGGGTTAGAGGGTAGCAGATTTAGCACAGAGATTTTAAATGAAGTTAGAGAAATGTTGAAAGGCAGTGAAAGTTCATACCAGGCAAGGATTGAAggagataatgataatgaaCTTTTTTTGGAATGGAAAGGGACATA 1553 0.3979 MMQPEILQDSWSIYVEVSSIFYQIESFNFNFNTQVNDCNFSSLYSRPEETYEVSTIPSPSIMFSNDFIEYPVDNFAQQLPSLMDDFSMDLGQIFDTQIVGIHGYPEENEGSFHSQHFSSEIADSWSPTPSTKSDSSAVHPSLTLPHEDMEIDNQLAIPILVEALAEAMEEEHNPLAEEIFKRLSQKVGPLGNTQERVAFNLCKDITCNAQEDYLRKEACKNMKPAFQTFYQWFPQGKVAHFAANSRILESIPEDSDEIHIVDFDMGEGVQWALMIETIAQKQHRTLKITSIKWEDEIPECVFAQWKFKDTKNKLFAHAKSCGLQLKVEEKGIEDLVIELKKMNKRGGSGKREWLAFNCMVGLPHMGRPRSRRYAMEFLRVAKDLIRSHGNNGIITFGDGDAIEKLKNCLNFKSFFKGNLVHYEALLESIEANFPKELSEARIAVFVAPYVSSLVWLRKWEEVGENCHLQGGIGLEGSRFSTEILNEVREMLKGSESSYQARIEGDNDNELFLEWKGT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00388 517 MobiDBLite consensus disorder prediction 111 140 - -
Bva02g00388 517 Coils Coil 325 345 - -
Bva02g00388 517 ProSiteProfiles GRAS family profile. 148 517 IPR005202 -
Bva02g00388 517 MobiDBLite consensus disorder prediction 110 140 - -
Bva02g00388 517 Pfam GRAS domain family 163 516 IPR005202 -
Bva02g00388 517 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 516 - -
Bva02g00388 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 516 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00388 Bva-Chr2 5554437 5555990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00388 176 444 GRAS Transcription Factor Family AT5G66770 27.305 2.48e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva02g00388 GRAS 5.5e-34 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00388 - - gmx:100784347 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00388 02 5554437 5555990 Bva02g00388 02 5554437 5555990 ECH