Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00386 ATGTTATCCAATGACTTTGCTGAATACCCACTAGAAAATTTTGCCCAGCAATTCCCATCACCAATGGAGGATTCCTCCATGGATTTTGGTAATGTATTTGATTCTATTTTGGCTTCCCAGATTGTTGGTATTCAAGGATACCCAGAAGAAAATGAGGGATACTTTCATTCCCAACATTTCTCTTCTGAGGTTGAAGATGCCTGGAGTCCCACCCCATCCATGAAGTCAGAATCTTCTGCAGTTCAAACACCACTGACCTTGCCACATGAAGACATGGAAATTGACAACCAATTGGCAATTCCAATTTTACTGGAGGCCCTTGCAGAAGCCATGGAAGAGGGACATAACACACTAGcacaagaaattttgaaatgccTTAGCCAGAAAGTTAGCCCACTTGGTAACACTCTGGAGCGTGTCGCATTCAACTTGGCTCAAGACATAACTTGCAATATTTCTCAGGAAGAGTACCTGAGAAAGGAGGCCCGCAAGAACTTGGAGATAGCCTTCCAGGCATTCTATCAATTGTTCCCACATAGTAAAGTTGCTCACTTTGCAGCAAATTCAAGAATCCTTGAATCAATACCAGAAGATTCAGATGAAATACACATAGTGGACTTTGATATGGGAGAAGGGGTTCAATGGGCTTCCCTAATCGAGGCCTTTGCACAAAACCAAACCAGAATTTTTAAACTTACTTCAATCAAATGGCAAGATGATGAGATCGCTGAGTGTCTTTTCGCTCCATGGAAGTTCGAGGACACGAAAAAGAAACTCTCTGTACATGCCAAATCCTGTGGCCTAAAGCTAATGGTTGAGGAAAAGGGAATTGAGGATTTGGTTATGGAGCTGAAAAGGATGAACAAGGGAGGAGGAAGTGGAAAGAGGGAATGGTTAGCCTTTAATTGCATGGTGGGTCTTCCTCATATGGCAAGGCCAAGGAGTAGAAGGCATGCCATGGAGTTCCTAAGGGCAGCTAAGGATTTGATATGCCTATGGAAACAAAGGTCATTCTTTGAAGGCAATTTAGGGCATTACCAAGCGTTGTTAGAGTCAATTGAAGCAAATTTCCCGAAAAAACACTCAGAAGCAAGAATTGCTATGGAATCTCTCTTTGGCGCACCTTACGTGTCTTCTCTTGCTTGGTTGCAGAAATGGGAGGAGGTAAGGGAAAATTGCTATCTCCACGGGGGAATTGGGTTAGAGGGTAGCAGATTTAGCAAATGGATTTTGACGAAAGTTACAGAAATGTCAAAAGGAAGTGAAAGTTCATACCAGACAAGGATTGAAGGAGATAATGGAAATGAACGTGTTTTGGAATGGAAAGGAACACAATTAGTGAGAGTTTCAACATGGGGACTTTA 1364 0.4186 MLSNDFAEYPLENFAQQFPSPMEDSSMDFGNVFDSILASQIVGIQGYPEENEGYFHSQHFSSEVEDAWSPTPSMKSESSAVQTPLTLPHEDMEIDNQLAIPILLEALAEAMEEGHNTLAQEILKCLSQKVSPLGNTLERVAFNLAQDITCNISQEEYLRKEARKNLEIAFQAFYQLFPHSKVAHFAANSRILESIPEDSDEIHIVDFDMGEGVQWASLIEAFAQNQTRIFKLTSIKWQDDEIAECLFAPWKFEDTKKKLSVHAKSCGLKLMVEEKGIEDLVMELKRMNKGGGSGKREWLAFNCMVGLPHMARPRSRRHAMEFLRAAKDLICLWKQRSFFEGNLGHYQALLESIEANFPKKHSEARIAMESLFGAPYVSSLAWLQKWEEVRENCYLHGGIGLEGSRFSKWILTKVTEMSKGSESSYQTRIEGDNGNERVLEWKGTQLVRVSTWGL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00386 454 Pfam GRAS domain family 103 329 IPR005202 -
Bva02g00386 454 ProSiteProfiles GRAS family profile. 91 453 IPR005202 -
Bva02g00386 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 452 IPR005202 -
Bva02g00386 454 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 2 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00386 Bva-Chr2 5523388 5524813 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00386 72 284 GRAS Transcription Factor Family AT5G41920 29.204 1.10e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva02g00386 GRAS 5.4e-32 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00386 - - gmx:100784347 436.032