Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00384 ATGATGCAGCCTGAGATTCTTCAAGATTCATGGTCAATCTATGAAGAATTGAGCTCAATTTTCGATCAAGCTGAAAGCtttagcttcaacgttgataCCCAGATGAGCGATCTTTACAGCACACCAGAGGAAACTTTTGAAGTTTCCACCATCCCCCGTTCATCTATAATGTTATCCAATGACTTTGCTGAACACCCACTAGAAAATTTTGAGCAGCAACTCCCCTCACCAATGGAGGATTCCTCCATGGATTTTGGTAATGTATTTGACTCTATTTTGGATTCCCAGATTGTTGGTATTCAAGGATACCCAGAAGAAAATGAGGGAAGCTTTCATTCCCAACAATTCTCTTCTGAGGTTGAAGATGCCTGGAGTCCCACCCCATCCATGAAGTCAGAATCTTCTGCAGTTCAACCACCACTGACCTTGCCACATGAAGACATGGAAATTGACAACCAATTGGCAATTCCAATTTTACTGGAGGCCCTTGCAGAAGCCATGGAAGAGGGACATAACCCCCTAGCgcaagaaattttgaaatgccTTAGCCAGAAAGTTAGCCCACTTGGTAACACTCTGGAGCGTGTCGCATTCAACTTGGCTCAAGACATAACTTGCAATATTTCTCAGGAAGATTACCTGAGAAAGGAGGCCTGCAAGAACTTGGAGCTAGCCTTCCAGGCATTCTATCAATTGTTCCCACATGGTAAAGTTGCTCACTTTGCAGCAAATTCAAGAATCCTTGAATCAATACCAGAAGATTCAGATGAAATACACATAGTAGACTTTGATATGGGAGAAGGGGTTCAATGGGCTTCCCTAATCGAGACCATTGCACAAAGACAACCCAGAATATTGAAACTTACTTCAATCAAATGGCAAGATGATGAGATCGCTGAGTGTCTTTTCGTTCCATGGAAGTTCGAGGACACGAAAAAGCAACTCTCTGTACATGCCAAATCCTGTGGCCTAAAGCTAATGGTTGAGGAAAAGGGAATTGAGGATTTGGTTATGGAGCTGAAAAGGATGAACAAGAGAGGAGGAAGTGGAAAGAGAGAATGGTTAGCCTTTAATTGCATGGTGGGTCTTCCTCATATGGCAAGGCCAAGGAGTAGAAGGCATGCCATGGAGTTCCTAAGGGCAGCTAAGGATTTGATATGCAGCTATGGAAACAAAGGTATTATCACTTTTGGCAATGGAGATGTCTGTGAGAAACTCAAGAATTGCATGAATTTCAGGTCATTCTTTGAAGGCAGTTTAGTGCATTACCAAGCGTTGTTAGAGTCGATTGAAGCAAATTTCCCGAAAAAACACTTAGAAGCAAGAATTGCTATggaatctctctttgtggcaCCTTACGTGTCTTCTCTTGCTTGGTTGCAGAAATGGGAGAAGGTAAGGGAAAATTGCCATCTCCAAGGGGGGATTGGGTTAGAGGGTAGCAGATTTAGCAAATGGATTTTGATGGAAGTTACAGAAATGTTAAAAGGAAGTGAAAGTTCATACCAGACAAGGATTGAAGGAGATAATGGAAATGAACTTGTTTTGGAATGGAAAGGAACACAATTAGTGAGAGTTTCAACATGGGGACTTTA 1595 0.4075 MMQPEILQDSWSIYEELSSIFDQAESFSFNVDTQMSDLYSTPEETFEVSTIPRSSIMLSNDFAEHPLENFEQQLPSPMEDSSMDFGNVFDSILDSQIVGIQGYPEENEGSFHSQQFSSEVEDAWSPTPSMKSESSAVQPPLTLPHEDMEIDNQLAIPILLEALAEAMEEGHNPLAQEILKCLSQKVSPLGNTLERVAFNLAQDITCNISQEDYLRKEACKNLELAFQAFYQLFPHGKVAHFAANSRILESIPEDSDEIHIVDFDMGEGVQWASLIETIAQRQPRILKLTSIKWQDDEIAECLFVPWKFEDTKKQLSVHAKSCGLKLMVEEKGIEDLVMELKRMNKRGGSGKREWLAFNCMVGLPHMARPRSRRHAMEFLRAAKDLICSYGNKGIITFGNGDVCEKLKNCMNFRSFFEGSLVHYQALLESIEANFPKKHLEARIAMESLFVAPYVSSLAWLQKWEKVRENCHLQGGIGLEGSRFSKWILMEVTEMLKGSESSYQTRIEGDNGNELVLEWKGTQLVRVSTWGL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00384 531 Pfam GRAS domain family 159 529 IPR005202 -
Bva02g00384 531 ProSiteProfiles GRAS family profile. 147 530 IPR005202 -
Bva02g00384 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 529 IPR005202 -
Bva02g00384 531 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 18 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00384 Bva-Chr2 5506880 5508475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00384 133 529 GRAS Transcription Factor Family AT5G66770 25.598 1.39e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva02g00384 GRAS 1.6e-44 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00384 - - gmx:100784347 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00384 02 5506880 5508475 Bva02g00384 02 5506880 5508475 ECH