Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00380 ATGGAAGGCAGCCATGGCAGCTCCGGTGAGTGCTCAAAAACATGCCCTTCTAACcgcgaagaagaagaagaggaagacgGGTATGAGAGCGAGGAGAACGAAGATGTGAACAAGCCAAATAACAATGGAGGAAGCTCAAGCAACAGCACAGTGGATGAGACTAGTGAGAAGAAGCCATCAGTGAGACCATATGTTAGATCCAAGCTGCCGAGGCTCCGGTGGACGCCTGATCTTCATCTTCGCTTTATTCATGCTGTTCAGAGACTTGGAGGACAAGAGAAAGCAACACCAAAGCTGGTTCTTCAATTGATGAATATCAAAGGGCTTAGTATTGCGCATGTCAAGAGTCATCTACAgATGTAtaggagcaagaaggtggatGATCCAAATCAAGTATTGGCTGAACATAGGCATCTTGTGGAAAGTGGAGACAGAAATATTTACAATCTTAGCCAACTACCAATGCTTCAAGGATACGGTCCAAACCAAACTTCGACGTTGAGATATGGTCCATATGGATACGGGGTTGCTCCTTTGGTTGTCTATGAGAAAATGATGCATAGACCTTTCATGGATCGGATTTCAATGGATCATGAATCTGGAGCTGGGCTTTATAACAAAATGACAGAGAAGATCTTTGGAACCAATGCTAACATCAATTGGACTAACAGCAGTTTCCGGATGGATACTTCAGATTTTGGTGAACAATCAACAAGTAAAATCCATGAACCCACAAAACAGGATTATTTCCTCTCATTTGGATCCCAAGAATCATTATGCACACAAGCAGGATTATTGGGTCAGATTGATCTTAATCCATTAACACATCAAAAGCCAAGAGCACAAGAGCTAATGCTTATCAATGAATCAGCCACGGCTTCGGATATCGATTCAGCAACAAACCCACCAGAgctgaagaaattaaaagggaaGGCTTCAGCTAACGACATTGATTTGGATTTGTCTCTCAAATTGAATTCAAGGAATGTTGTTGAGAATAAGAGAAGTTTGGAGGAACATGAGGTTGATAGTaatctatctctctctttttactCTCAATCTTCGTCATCTAATCTTAGCAGTAGGTTGAAGGAAGTAAATGATAATTGTAATAAGGAACAAGGGAAAAGGGTGAGTACTCTGGATCTGACTATATG 1157 0.3846 MEGSHGSSGECSKTCPSNREEEEEEDGYESEENEDVNKPNNNGGSSSNSTVDETSEKKPSVRPYVRSKLPRLRWTPDLHLRFIHAVQRLGGQEKATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDDPNQVLAEHRHLVESGDRNIYNLSQLPMLQGYGPNQTSTLRYGPYGYGVAPLVVYEKMMHRPFMDRISMDHESGAGLYNKMTEKIFGTNANINWTNSSFRMDTSDFGEQSTSKIHEPTKQDYFLSFGSQESLCTQAGLLGQIDLNPLTHQKPRAQELMLINESATASDIDSATNPPELKKLKGKASANDIDLDLSLKLNSRNVVENKRSLEEHEVDSNLSLSFYSQSSSSNLSSRLKEVNDNCNKEQGKRVSTLDLTI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00380 385 Gene3D - 69 126 - -
Bva02g00380 385 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 70 125 IPR006447 GO:0003677
Bva02g00380 385 SUPERFAMILY Homeodomain-like 69 124 IPR009057 -
Bva02g00380 385 MobiDBLite consensus disorder prediction 1 64 - -
Bva02g00380 385 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 126 IPR017930 -
Bva02g00380 385 PANTHER - 7 385 - -
Bva02g00380 385 Pfam Myb-like DNA-binding domain 72 122 IPR001005 -
Bva02g00380 385 MobiDBLite consensus disorder prediction 37 54 - -
Bva02g00380 385 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 385 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00380 Bva-Chr2 5472182 5474613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00380 7 127 G2-like Transcription Factor Family AT2G42660 54.545 2.58e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva02g00380 Myb_DNA-binding 8.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00380 - - gsj:114395715 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00380 02 5472182 5474613 Bva02g00380 02 5472182 5474613 ECH