Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00370 ATGAACCCTACCTCCTCTGCTGGTTCATCGTCCAAGGTAACCAAAAGcaagggaaagaaaagtgGGAAGAAGGGCAAGGGAATGAAGCTTTCCACTGACCCACAAAGCGTGGCTGCTAGGGAAAGGAGGCATCGGATCAGTGACCGGTTCAAGATCTTGCAGAGCATGGTTCCTGGCGGGAACAAGATGGACACAGTGTCTATGTTAGAGGAAGCCATTCAATACGTTAAGTTCCTCAAAACCCAGATTTGGCTTCACCAAACTATGATAAATTATGTGGATGACGAATGCTCACCCATGTTTATACCTGAATATCTCCATGCCCATCAAGAGAATTCTCTTCAAATTCCACTAAACAGTTCCATAGATAATTCGCTGCAGAATTTCCCACAGCTGCCACTGACCCAGTCACGCTTCCATAGTGAAGCTACCACGTTTGATGCCAATATCAACAAATATTGGCCAGCGTA 470 0.4426 MNPTSSAGSSSKVTKSKGKKSGKKGKGMKLSTDPQSVAARERRHRISDRFKILQSMVPGGNKMDTVSMLEEAIQYVKFLKTQIWLHQTMINYVDDECSPMFIPEYLHAHQENSLQIPLNSSIDNSLQNFPQLPLTQSRFHSEATTFDANINKYWPA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00370 156 Pfam Helix-loop-helix DNA-binding domain 40 79 IPR011598 GO:0046983
Bva02g00370 156 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 11 122 IPR045843 GO:0003700|GO:0006355
Bva02g00370 156 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 79 IPR011598 GO:0046983
Bva02g00370 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 35 94 IPR036638 GO:0046983
Bva02g00370 156 MobiDBLite consensus disorder prediction 1 15 - -
Bva02g00370 156 MobiDBLite consensus disorder prediction 1 43 - -
Bva02g00370 156 CDD bHLH_AtIND_like 31 90 - -
Bva02g00370 156 SMART finulus 36 85 IPR011598 GO:0046983
Bva02g00370 156 Gene3D - 29 88 IPR036638 GO:0046983
Bva02g00370 156 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 11 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00370 Bva-Chr2 5387329 5387799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00370 24 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 45.631 2.05e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva02g00370 HLH 3.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00370 - - pvu:PHAVU_010G073400g 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00370 02 5387329 5387799 Bva02g00370 02 5387329 5387799 ECH