Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00360 ATGGACATGGACGTCGACGAAACTTGTAAAGCCCAAGCAGAGGAAAAGCCCCTCTTGGTGATATTGGTGGGAGCACCAGGTAGTGGCAAGTCCACTTTCTGTGAAGATGTTATGCGCTCCTCTTCTAGACCTTGGGTTCGCGTTTGCCAGGATACTATTGGAAATGGTAAAGCTGGAAATAAAGCTCAGTGCCTAAGCAGTGCAGCCAATGCGTTGAAAGATGGAAAAAGTGTGTTTATTGACAGGTGCAATCTTGATAGAGAACAACGTTCAGACTTTGTAAAACTTGGTAGAGCCCAGATAGATATGCATGCCGTGGTTCTTGATCTTCCTGCAAAGCTCTGCATTTCTCGATCTGTCAAACGTACAGGACATGAAGGAAATCTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTGCAAAAGaaagagcttccaaagctaAGTGAAGGGTTTAACCGGATCACATTTTGTCATAATGAAAGTGACGTGGTAGCAGCTGTTAACACATATAGTGCTCTTGGGCCACGGGATAACCTTCCACATGGCTGCTTTGGCCAGAAGAATCCAGATGCCAAAGTTCAAGTTGGTATAATGAAGTTCCTAAAAAAAGCCCCTGCTGATGCTGCATCTAGTGAGAATAGCATCAGAAATTCTATTTCTCCACAAACTTTTGAAAAACAGGGTTCCTCCTGCAAAGCTGTTGAAAagttttcttcactttcagATAATGCCGTCTTAAAGTCAAAGGAAGTGGAAAAACCAGCAGTTCGCTCTGGTTCTCATGCCAGTCATGTCTCTCTTGATGATGTTCCCACTTTGGCATTTCCATCCATTTCGACATCTGATTTCCAGTTCAGTCACGAGAAGGCCGCTGATATTATTGTGGATAAAGTGTTAGAGTTTTCAGATAAGCTTGGAAATGCCAGGCTTGTTTTAGTGGACTTGTCTCATAAATCAAAGATTCTTTCCTTAGTTAAAGCCAAAGCTGCACAAAAAAACATtgacacaagaaaattttttacacATGTGGGAGATATCACTTGCCTTTATTCTGGGGGAGGTTTGCGCTGTAGTGTCATAGCTAATGCTGCCAACTGGCGGTTGAAACCTGGAGGTGGAGGTGTTAATGCTGCCATTTTCAATGCTGCTGGTCCTGCCTTGGAGTCTGCAAccaaagaaagagcaaaatctCTTCTACCTGGGAATGCTATTGTTGTCCCTCTACCTTCACGTTCTCCTTTGTTTGTTAGAGAGGGAGTAACTCATGTTATACatgttcttggaccaaatatgaACCCACAGAGACCAAATTATCTTGGTAATGATTATGGTAAAGGCTGCAAAATCCTCCAAGATGCTTACACTTCACTATTTGAAGGCTTTGCATCAATTTTGAGGACCCAAGCAGTGCAATCTGGGGGAAGAAACGAAGGCCTTGGAACTAAATCTTTGGAGCATTCTGAGAATTCTCCCAGAAATCATTTAACAAATACTGATCAAAAGATGAAGAGAGATGAAGTTCATGAAtctgagaagagaagaaaatacaagGGATCTGAGGATGATTTTGAAATCGACTTTACTCATTCTAGAGCTGGAAAGATAGatataaaggagaaaaaggcTGTTGCAAGCACGCATAAGGCATGGGGTTCTTGGGCTCAAGCACTTTATCACATTGCTATTTATCCTGAAAGGCACAAGGATGATTTGCTAGAAATATCAGAAGATGTTATAGTACTAAACGATGTTTACCCAAAGGCACAGAAGCATGTGCTTGTGTTGTCACGAACTGAAGGCCTTGATTGCCTGTCAGATGTTAAAAAAGATCACCTTCAGCTATTGAAGAAGATGCATGCAGTGGGTTTAAAGTGGGCTGAGAAGTTCTTGCAAGAGAATGCTTCATTATCATTTCGCCTCGGATATCACTCAGCGCCATCTATGCGACAACTGCATTTACACGTTATAAGCCAGGACTTCGATTCAAAACATTTGAAGAATAAGAAGCACTGGAACTCCTTTAACACTGTTTTTTTTCGCGACTCAGTAGATGTAATTGATGAGGTCTCTAATCATGGGAAAGCAACCTTGAAAGACGATGACAAGTTGCTGGCTATGGAGTTGCGATGCCACAGATGTAGAAGTGCTCATCCCAACATACCAAGGTTAAAATCACATATTAGCAGTTGCCGAGCCTCCTTTCCTGCATATCTACTAGAAAATGGTCGTCTTGTACATGCAGCAGCACCAGCTGAAGCTGGTAGCAGTTA 2279 0.4015 MDMDVDETCKAQEEKPLLVILVGAPGSGKSTFCEDVMRSSSRPWVRVCQDTIGNGKAGNKAQCLSSAANALKDGKSVFIDRCNLDREQRSDFVKLGRAQIDMHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGFNRITFCHNESDVVAAVNTYSALGPRDNLPHGCFGQKNPDAKVQVGIMKFLKKAPADAASSENSIRNSISPQTFEKQGSSCKAVEKFSSLSDNAVLKSKEVEKPAVRSGSHASHVSLDDVPTLAFPSISTSDFQFSHEKAADIIVDKVLEFSDKLGNARLVLVDLSHKSKILSLVKAKAAQKNIDTRKFFTHVGDITCLYSGGGLRCSVIANAANWRLKPGGGGVNAAIFNAAGPALESATKERAKSLLPGNAIVVPLPSRSPLFVREGVTHVIHVLGPNMNPQRPNYLGNDYGKGCKILQDAYTSLFEGFASILRTQAVQSGGRNEGLGTKSLEHSENSPRNHLTNTDQKMKRDEVHESEKRRKYKGSEDDFEIDFTHSRAGKIDIKEKKAVASTHKAWGSWAQALYHIAIYPERHKDDLLEISEDVIVLNDVYPKAQKHVLVLSRTEGLDCLSDVKKDHLQLLKKMHAVGLKWAEKFLQENASLSFRLGYHSAPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTVFFRDSVDVIDEVSNHGKATLKDDDKLLAMELRCHRCRSAHPNIPRLKSHISSCRASFPAYLLENGRLVHAAAPAEAGSS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00360 758 MobiDBLite consensus disorder prediction 474 517 - -
Bva02g00360 758 SUPERFAMILY Macro domain-like 322 461 IPR043472 -
Bva02g00360 758 ProSitePatterns HIT domain signature. 641 659 IPR019808 -
Bva02g00360 758 SMART YBR022w_8 340 475 IPR002589 -
Bva02g00360 758 SUPERFAMILY Macro domain-like 273 315 IPR043472 -
Bva02g00360 758 SUPERFAMILY HIT-like 545 716 IPR036265 -
Bva02g00360 758 Pfam C2HE / C2H2 / C2HC zinc-binding finger 677 730 IPR032566 -
Bva02g00360 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 163 IPR027417 -
Bva02g00360 758 ProSiteProfiles Macro domain profile. 328 513 IPR002589 -
Bva02g00360 758 Pfam AAA domain 18 143 - -
Bva02g00360 758 Gene3D - 554 736 IPR036265 -
Bva02g00360 758 Gene3D Leucine Aminopeptidase, subunit E, domain 1 332 474 IPR043472 -
Bva02g00360 758 MobiDBLite consensus disorder prediction 474 498 - -
Bva02g00360 758 Gene3D Leucine Aminopeptidase, subunit E, domain 1 262 331 IPR043472 -
Bva02g00360 758 Pfam Scavenger mRNA decapping enzyme C-term binding 564 672 - -
Bva02g00360 758 PANTHER APRATAXIN 15 751 IPR026963 GO:0003677|GO:0006281|GO:0033699
Bva02g00360 758 MobiDBLite consensus disorder prediction 499 517 - -
Bva02g00360 758 Pfam Macro domain 363 435 IPR002589 -
Bva02g00360 758 PANTHER APRATAXIN-RELATED 15 751 - -
Bva02g00360 758 Gene3D - 4 172 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00360 7 750 C2H2 Transcription Factor Family AT5G01310 58.871 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00360 K10863 - gmx:100786762 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00360 02 5294506 5299233 Bva02g00360 02 5294506 5299233 ECH