Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00345 ATGACTGATGTGAATGTTGCTTCCTTTGAGGCATTTCTGCAAGCATGGACGGTGCGCCAGAATAAGTACCTTGAGGACCTTCGATCAGCTCAGCAACACTGCCATGAATTGCAAGATGCTGATTTGAGAGTGTTGATTTCAATGGTTCTATCCCATTATCAGCAATACTTTGAAGAGAAATCCAGAATTGCCCAACACAATGTTTTGCTTGTTTTCTCCCCACCTTGGTTCAGTTCATTGGAAAGAACCTTTCTTTGGATTGCTGGGTTCAAGCCCGGGACTGGTGTTCAGCTTGTGAACACAGCCTTGGATGATTTGACTGAAGAACAGAACATGAGGCTGAGGCAGCTGAAGCAGGAGACCAAGTCAGAGGAGAGAGTTCTCAATGACAAATTGGCCAAGATTCATGAGAGTGTGGCGGCGCCGCCATTGGTGGAAATGGGAAGGCACCATGGGAGATTATGTCTAAATGAATTGGGGATTGCAGAGGAGAATGAGGTGCCAAGTTCTCTAAAGGCATCTTTGGAGGCTTTGGTGGCAAATGCAGATGAATTGAGAATAAACACAGTTTTGAAGATAGTGGAGATTTTGAGACCAgctcagactgtgaaactctTAGTGGCTGTGGCTGAGCTTCTACACAAGATTAGGATGTGGGGTTTGGAGAATGATAAGCAGAGAAGCATAGGTTA 692 0.4393 MTDVNVASFEAFLQAWTVRQNKYLEDLRSAQQHCHELQDADLRVLISMVLSHYQQYFEEKSRIAQHNVLLVFSPPWFSSLERTFLWIAGFKPGTGVQLVNTALDDLTEEQNMRLRQLKQETKSEERVLNDKLAKIHESVAAPPLVEMGRHHGRLCLNELGIAEENEVPSSLKASLEALVANADELRINTVLKIVEILRPAQTVKLLVAVAELLHKIRMWGLENDKQRSIG 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00345 230 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Bva02g00345 230 PANTHER - 6 227 - -
Bva02g00345 230 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 6 227 - -
Bva02g00345 230 Coils Coil 114 134 - -
Bva02g00345 230 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00345 Bva-Chr2 5180034 5181829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00345 3 217 Calmodulin-binding Proteins AT1G77920 29.412 1.46e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00345 - - gmx:100780874 294.278