Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00339 ATGGATAGACATCTTCTGCAGCAtcagcttcatcttcatcagcAGCAGCATCAACAGCAGTTGCAACAACAACATAGTACTAGTATTAACGTTGATGTTGGTGATAGGTTTCCTCAATGGAGTATTCAGGAAACGAAGGAGTTCTTGATGATCCGAGCAGAGCTGGATCAGACTTTCATGGAGACCAAGAGGAACAAGCAGCTCTGGGAAGTTATCTCGAACAGGATGAAGGAGAAGGGTTACAATCGCAGCGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGGTACAAGGGATATGAAACGATGGACCAAGAAGCCATGAGACAACAATTCCCATTCTACACCGAATTCCAAACAATTTTCGCGGCGAGGATGCAGAGAATGCTGTGGGCAGAAGCTGAGGGCACCGGGTCGAAGAAGAAGGCGGTGCACCTCTCATCGGAGGAAGAGGATGATAATGAAGACAGCGAGGGAGAGAAGGGGACAagtaggaagaagaaaaagggcaAGGTTGGTGGAGGTGCTAGTGGTAGTGGTAGCAGCGGTGCTGGTGCAATAAACAACTTGAAGGAGATTTTAGAAGATTTCATGAGACAACAAATGCAAATAGAAGCACAATGGATGGAAGCATTTGAAGCAAGAGAGAATGAAAGGAGATTAAAGGAGCTGGAATGGAGGCAAGCCATGGAAGCAATGGAGAATGAGAGGATAATGATGGAGCAGAGatggagagaaagagaagaacaaaGAAGGATTAGAGAAGAAGCTAGGGCTGAAAAGAGAGATGCTCTAATCACAGCTCTGTTGAACAAGATCAGAAGAGAAGAGATGTA 842 0.4276 MDRHLLQHQLHLHQQQHQQQLQQQHSTSINVDVGDRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWEVISNRMKEKGYNRSAEQCKCKWKNLVTRYKGYETMDQEAMRQQFPFYTEFQTIFAARMQRMLWAEAEGTGSKKKAVHLSSEEEDDNEDSEGEKGTSRKKKKGKVGGGASGSGSSGAGAINNLKEILEDFMRQQMQIEAQWMEAFEARENERRLKELEWRQAMEAMENERIMMEQRWREREEQRRIREEARAEKRDALITALLNKIRREEM 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00339 280 Pfam Myb/SANT-like DNA-binding domain 39 121 IPR044822 -
Bva02g00339 280 ProSiteProfiles Myb-like domain profile. 40 96 IPR001005 -
Bva02g00339 280 Coils Coil 272 280 - -
Bva02g00339 280 Coils Coil 189 209 - -
Bva02g00339 280 MobiDBLite consensus disorder prediction 142 188 - -
Bva02g00339 280 PANTHER - 1 278 - -
Bva02g00339 280 CDD GT1 38 101 - -
Bva02g00339 280 Gene3D - 40 101 - -
Bva02g00339 280 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00339 Bva-Chr2 5118373 5120071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00339 35 278 Trihelix Transcription Factor Family AT5G01380 53.532 7.65e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva02g00339 Myb_DNA-bind_4 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00339 - - gmx:100818384 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00339 02 5118373 5120071 Bva02g00339 02 5118373 5120071 ECH