Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00336 ATGGGTTCCAACCGCTCTGTTGGCTCTGCAAAAGAACGTCTTCGTTGGACAGCTGAACTTCATGATCAATTTGTGGAAGCTGTAAATAGGCTTGGTGGCCCTGATAGCGCAACACCAAAGGGTATACTCAAGGTTATGGGAGTTGAGGaattaaacatttttcatGTCAAAAGCCACTTGCagaaATACAGGATGTCCAAACTGGTTCCAGAATCCACTACTAAAGGAAAGGCTGAAAGAAGAACCATATCAGATATTCTGCCCAATTTCAGCGCAATTTGCGCTATTCAGTTAAAGGAAGCTCTGGAAACGCAGTTGGGAGTGCAAAAACAGTTGAATGAAGAAATAGAGGTTCAAAGAAGTTTGAAGCTTAAGTTTGAGGCCATAGGAAGGTACATGGAAGGAATGACAAAGAATTTTCAGAACAGAGAAGCAATGACTAGAAAACGATGCAAACCAACTTCTCCATCATCTCTGCCTTCTTTATGCGAAGATTCTGAATCCAATTGCTATAAAGATTGTGAATCCGACTCAGAAATACACATAGAGGAAGAACAAAGCAGAGCGAGGAAAAAACTTCGGATTGATCAAGAAAATGATTTGgaaacaagtttcaaagttgccTCACCCACTTCATCAGATCAATTCTATCATCAAAGTTGGAacctttcttggtctcaaattgCATCTTGCCAGTCACCTTTGATACCCAGCTTCTTATTTTA 725 0.3766 MGSNRSVGSAKERLRWTAELHDQFVEAVNRLGGPDSATPKGILKVMGVEELNIFHVKSHLQKYRMSKLVPESTTKGKAERRTISDILPNFSAICAIQLKEALETQLGVQKQLNEEIEVQRSLKLKFEAIGRYMEGMTKNFQNREAMTRKRCKPTSPSSLPSLCEDSESNCYKDCESDSEIHIEEEQSRARKKLRIDQENDLETSFKVASPTSSDQFYHQSWNLSWSQIASCQSPLIPSFLF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00336 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 192 - -
Bva02g00336 241 Pfam Myb-like DNA-binding domain 14 64 IPR001005 -
Bva02g00336 241 Pfam MYB-CC type transfactor, LHEQLE motif 96 138 IPR025756 -
Bva02g00336 241 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 11 66 IPR006447 GO:0003677
Bva02g00336 241 Gene3D - 10 68 - -
Bva02g00336 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 192 IPR044848 GO:0003700
Bva02g00336 241 SUPERFAMILY Homeodomain-like 10 65 IPR009057 -
Bva02g00336 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 68 IPR017930 -
Bva02g00336 241 Coils Coil 99 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00336 Bva-Chr2 5044812 5046847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00336 3 196 G2-like Transcription Factor Family AT4G28610 42.564 2.35e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva02g00336 Myb_DNA-binding 2.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00336 - - aip:107639556 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00336 02 5044812 5046847 Bva02g00336 02 5044812 5046847 ECH