Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00334 ATGGGCGTCGACTACTACAAGATTCTTCAAGTAGACAAAAACGCCAAGGACGATGACCTCAAGAAAGCTTATCGAAAGCTTGCTATGAAATGGCATCCTGATAAAAACCCTAACAACAAGAAAGATGCTGAAGCCAAATTCAAGCAAATCTCTGAAGCTTACGATGTTTTGAGTGATCCACAGAAGCGAGCCGTGTATGATCAGTATGGTGAGGAAGGATTGAAGGGGCAGGTACCTCCCCCCGGTGCCGGTGGGTTTTCCGGTGCGTCTGATGGGGGACCCACAATGTTCCGGTTCAACCCAAGAAGCGCAGACGATATATTCTCAGAGTTTTTTGGGTTTTCCAGTCCGTTCGGTGGGATGAGTGGTATGGGTGGGATGGGTGGCCGTGCGGGTGGGCCCAGCTTTCACAGGAGTATGTTTGCTGATGATATATTTGCTCAATTTAGGAGTGGAGCTGGAGAGGGCTCTGGGAATATGCCAAGGAAAGGTGTAGCAATAGAGCGATCGCTACAATGCAGTTTGGAGGAGTTGTATAAAGGGactacaaagaaaatgaagatttcGAGGGATGTTACTGATGCCAGTCGGAGGCCGACCACAGTAGAGGAAATTCTTACAATTGAGGTCAAGCCAGGTTGGaagaaaggaacaaaaataactttccCAGAGAAGGGAAATGAACAGAGCGGGATTATACCGTCCGATCTCGTCTTTATCATCGATGAGAAGCCTCATAATGTATTCAAGAGGGATGGCAATGATCTTGTCGTCACCCAGAAAATATCCCTGGTAGAAGCTCTGACGGGTTATACAGCGCAGCTGACAACCCTTGATGGGCGGAATCTTACAGTGCCCATCAACTCCATCATCAGTCCCTCACACGAAGAAGTTGTAAAAGGTGAGGGAATGCCCATTCCCAAAGAACCTTCTAAAAAGGGAAATTTGAGAATCAAGTTTCATATCAAGTTCCCCTCCAGGCTTACATCAGAGCAGAAAACTGGTATTAAGCGGTTATTATCGTCTCCATA 1031 0.453 MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFSGASDGGPTMFRFNPRSADDIFSEFFGFSSPFGGMSGMGGMGGRAGGPSFHRSMFADDIFAQFRSGAGEGSGNMPRKGVAIERSLQCSLEELYKGTTKKMKISRDVTDASRRPTTVEEILTIEVKPGWKKGTKITFPEKGNEQSGIIPSDLVFIIDEKPHNVFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRNLTVPINSIISPSHEEVVKGEGMPIPKEPSKKGNLRIKFHIKFPSRLTSEQKTGIKRLLSSP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00334 343 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 341 - -
Bva02g00334 343 CDD DnaJ 4 59 IPR001623 -
Bva02g00334 343 Gene3D - 165 244 - -
Bva02g00334 343 Pfam DnaJ C terminal domain 167 325 IPR002939 -
Bva02g00334 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 248 334 IPR008971 GO:0006457|GO:0051082
Bva02g00334 343 Pfam DnaJ domain 4 67 IPR001623 -
Bva02g00334 343 PRINTS DnaJ domain signature 6 24 IPR001623 -
Bva02g00334 343 PRINTS DnaJ domain signature 24 39 IPR001623 -
Bva02g00334 343 PRINTS DnaJ domain signature 62 81 IPR001623 -
Bva02g00334 343 PRINTS DnaJ domain signature 42 62 IPR001623 -
Bva02g00334 343 Gene3D DnaJ domain 3 123 IPR036869 -
Bva02g00334 343 Gene3D - 246 326 - -
Bva02g00334 343 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Bva02g00334 343 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 341 - -
Bva02g00334 343 MobiDBLite consensus disorder prediction 72 95 - -
Bva02g00334 343 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Bva02g00334 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 168 246 IPR008971 GO:0006457|GO:0051082
Bva02g00334 343 SMART dnaj_3 3 62 IPR001623 -
Bva02g00334 343 CDD DnaJ_C 167 328 - -
Bva02g00334 343 SUPERFAMILY Chaperone J-domain 3 122 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00334 Bva-Chr2 5033920 5037084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00334 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.14e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00334 K09510 - gmx:100777607 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00334 02 5033920 5037084 Bva02g00334 02 5033920 5037084 ECH