Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00312 ATGGCTGTGAAGGaacaatttttaaagcaaCTGACTACCTCTGCTATGAAGATGACACCAATGTACTTGAAAGATGTGTATGGAATTCTGTCATTGGGGGTTCAAGGTAATCAAATTGCAGCAGTTGAAGAGCCCAATATAAAGATTGGAAGGTAttcagaagaagaaaggaaggaaagaatTCTGctatatttgaagaaaagaaatctaaggaacttcaacaaaacaatcaagTATGCATGCCGGAAAACCCTAGCTGATCGGCGAGTCAGAGTTAGGGGCAGATTTGCAAGAAACAGTGAGCTATGTGAGGAGGAAACAGCAATGACAAAGACTGAGAGTCTTCACAAAGAAGACTTGGATTGTGGTGATTCTATTCATTATCAGATAAATGAATTCTTAGCACAATCTTA 413 0.322 MAVKEQFLKQLTTSAMKMTPMYLKDVYGILSLGVQGNQIAAVEEPNIKIGRYSEEERKERILLYLKKRNLRNFNKTIKYACRKTLADRRVRVRGRFARNSELCEEETAMTKTESLHKEDLDCGDSIHYQINEFLAQS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00312 137 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 32 120 - -
Bva02g00312 137 Pfam CCT motif 57 99 IPR010402 GO:0005515
Bva02g00312 137 ProSiteProfiles CCT domain profile. 57 99 IPR010402 GO:0005515
Bva02g00312 137 PANTHER ACTIVATOR OF SPOMIN::LUC2 32 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00312 Bva-Chr2 4692500 4694934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00312 53 105 C2C2-CO-like Transcription Factor Family AT5G15850 45.283 6.31e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva02g00312 CCT 4.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00312 - - gmx:102660475 151.369