Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00287 atgcGGAAGTCTTTCAAGGATTCCCTCAAAGCTCTTGAAGCTGATATTCAGTTCGCCAATACCCTAGCTTCTGAATATCCAAGAGACGGTGATGGTGCCTGCTTCCAAATGAGATTGTCCTACAGCCCTGCTgctcagatttttctttttctagttcAGTGGACCGATTGCCACCTTGCCGGAACATTGGGATTTCTTAGAATTCTAATATACAAGGCGTATGCCGATGGGAAGACAACCATGTACATTCATGAAAGGAAAGCCAGTCTGAAGGAGTTCTATTGTGTGATTTTCCCCTCTTTGTTGCAACTTCAGAGGGGAATCACTGATGTGGAAGAGAGGAAGCAAAGCGAAATATGTGCTACGAAGTATAAGCGGAAAGACGCGATGAGCAAAGGAAAGCTGTCtgaaattgataaagagagagaagaagaatgtgGTATCTGCATGGAGATGAACTCCAAGGTTGTATTGCCCACTTGCAACCACTCAATGTGCATGAAATGCTACCAAAACTGGCGTGTGAGATCGCAGTCTTGCCCTTTCTGCCGGAACTGTCTTAAAAGGGTAAACTCTGGCGACCTTTGGATCTTCATGAGCAGCAGTGAGGTACATGACTTGGCTGCAATCACCAAGGAGAACGCAAAGAGGCTGTTTATGTACATAGAAAAGTTGCCTCTCATTGTTCCAGATCCTATATTTGTGTCTTATCCTCATCGCTACTG 725 0.4179 MRKSFKDSLKALEADIQFANTLASEYPRDGDGACFQMRLSYSPAAQIFLFLVQWTDCHLAGTLGFLRILIYKAYADGKTTMYIHERKASLKEFYCVIFPSLLQLQRGITDVEERKQSEICATKYKRKDAMSKGKLSEIDKEREEECGICMEMNSKVVLPTCNHSMCMKCYQNWRVRSQSCPFCRNCLKRVNSGDLWIFMSSSEVHDLAAITKENAKRLFMYIEKLPLIVPDPIFVSYPHRY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00287 241 SUPERFAMILY RING/U-box 133 189 - -
Bva02g00287 241 PANTHER RING FINGER PROTEIN 41, 151 1 240 - -
Bva02g00287 241 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Bva02g00287 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 193 IPR013083 -
Bva02g00287 241 PANTHER E3 UBIQUITIN-PROTEIN LIGASE AIRP2 1 240 - -
Bva02g00287 241 SMART ring_2 146 183 IPR001841 -
Bva02g00287 241 Pfam Zinc finger, C3HC4 type (RING finger) 143 188 - -
Bva02g00287 241 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00287 Bva-Chr2 4336936 4340417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00287 22 212 C2H2 Transcription Factor Family AT5G39550 23.223 5.79e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00287 K25840 - zju:107430836 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00287 02 4336936 4340417 Bva02g00287 02 4336936 4340417 ECH