Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00286 ATGAAGACTGCTAAGGGGAAAGGAACAGCAAGGACCTCAAGGGAGTCATTGAAGCCTGTTGATGACCGAAAGGCTGGAAAGAGAAAGGCTGCTGCCAAGCCTGACATACGGAAGTCCAAGAAGAAGACGAAGGCAACTAAAGATCCTAACAAACCGAAACGACCGCCCAGTGCTTTCTTTGTCTTCCTTGAGGAGTTTAGGAAGACCTTTAAGGCAGAAAATCCCAATGTGAAGGCTGTATCAGCTGTTGGAAAAGCTGGAGGAGAGAAATGGAAATCCATGACTGATGCAGAGAAAGCTCCATATGAAGCCAAGGCCGCCAAAAGGAAGGCTGAGTATGAAAAAGTTATGAATGCATACAATAAGAAACAGGCAAGCTCGGCCGATGATGGAGATGATGAATCAGAAAGGTCAAAATCTGAAGTGCATGATGAAGACGAAGAAGCTAGTGCTGAGGAAGAGGAGAATGACGAGGAGGACGAAGACGATGACGACGAGGGTGACTG 506 0.4684 MKTAKGKGTARTSRESLKPVDDRKAGKRKAAAKPDIRKSKKKTKATKDPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSAVGKAGGEKWKSMTDAEKAPYEAKAAKRKAEYEKVMNAYNKKQASSADDGDDESERSKSEVHDEDEEASAEEEENDEEDEDDDDEGD 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00286 168 MobiDBLite consensus disorder prediction 8 29 - -
Bva02g00286 168 MobiDBLite consensus disorder prediction 146 168 - -
Bva02g00286 168 MobiDBLite consensus disorder prediction 1 57 - -
Bva02g00286 168 Coils Coil 142 162 - -
Bva02g00286 168 MobiDBLite consensus disorder prediction 30 48 - -
Bva02g00286 168 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 163 IPR031061 -
Bva02g00286 168 SUPERFAMILY HMG-box 38 122 IPR036910 -
Bva02g00286 168 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 52 121 IPR009071 -
Bva02g00286 168 MobiDBLite consensus disorder prediction 91 117 - -
Bva02g00286 168 SMART hmgende2 51 122 IPR009071 -
Bva02g00286 168 Gene3D High mobility group box domain 35 137 IPR036910 -
Bva02g00286 168 MobiDBLite consensus disorder prediction 126 145 - -
Bva02g00286 168 MobiDBLite consensus disorder prediction 84 168 - -
Bva02g00286 168 CDD HMGB-UBF_HMG-box 52 117 - -
Bva02g00286 168 PANTHER HIGH MOBILITY GROUP B PROTEIN 1 1 163 - -
Bva02g00286 168 Pfam HMG (high mobility group) box 52 121 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00286 Bva-Chr2 4333405 4335844 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bva02g00286 HMG_box 2e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00286 K25507 - egr:104419103 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00286 02 4333405 4335844 Bva02g00286 02 4333405 4335844 ECH