Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00283 ATGGGATCAACAAGCTCTGTATGgaattttacaaagaaatttgTCACATTTGGGCTTATTTATGTAACTGTGACGGATCGTTATGTAAGTGTTGTTCCAGTACGAGGTGACTCTATGTCTCCCACTTTAAATCCTAAATCCAGTTCTttgatgagaaatttttttgATGACCGTGTTGTGGTTGAGAAATTCTGCCTTGACAAGTATAATTTTTCACCTGGTGATGTGGTGGTCTTTAATTCCCCTTTGAATCACAGGGAGATGCACATAAAGAGAATAAGGGCATTACCTGGTGAGTGGTATGGGTCCAAAGATAACTACGATGTAGTGAAGATTCCAGAAGGGCGTTGTTGGGTGGAAGGGGACAATGCAATGTCTAGCATGGATTCTAGGTTCTTTGGTCCTATTCCTTTGGGTCTAATTAAAGGAAGGGTGACCCACATTGTGTGGCCTCCTCATAGAATAGGTGCAATCAACAAGACTTCATCAAAGTG 494 0.3927 MGSTSSVWNFTKKFVTFGLIYVTVTDRYVSVVPVRGDSMSPTLNPKSSSLMRNFFDDRVVVEKFCLDKYNFSPGDVVVFNSPLNHREMHIKRIRALPGEWYGSKDNYDVVKIPEGRCWVEGDNAMSSMDSRFFGPIPLGLIKGRVTHIVWPPHRIGAINKTSSK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00283 164 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 3 161 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Bva02g00283 164 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Bva02g00283 164 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva02g00283 164 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva02g00283 164 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva02g00283 164 Pfam Signal peptidase, peptidase S26 9 99 IPR019533 GO:0004252|GO:0006465
Bva02g00283 164 Pfam Signal peptidase, peptidase S26 109 150 IPR019533 GO:0004252|GO:0006465
Bva02g00283 164 Gene3D Umud Fragment, subunit A 25 161 - -
Bva02g00283 164 CDD S26_SPase_I 30 145 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00283 Bva-Chr2 4324416 4329169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00283 39 163 MADS-box Gene Family AT1G29960 32.824 7.94e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00283 K09648 - pvy:116130626 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00283 02 4324416 4329169 Bva02g00283 02 4324416 4329169 ECH