Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00276 ATGCCAATGATTAGCAATTGCTTTGGTTCCTTGAATTGGTGTAAGGGGAGGAAAGATCCTTCTGCCCAGTCGGAGCAAGTAATTGCAACTAAAACTTTTAGTTATAGTTCCTTGAGATCAGCAACAGGAGATTTCCATCCATCAAGCAGAATTGGTGGTGGAGGTTACGGAGTTGTCTACAAGgGAGTTCTAAAGGATGGTACTCCAGTAGCTATCAAGTCCCTTTCTGTAGAATCTAAACAAGGAACACATGAATTCATGACAGAAATTGATCTGATATCAAATATACAACATCCAAATCTTGTGCAACTGATTGGCTGCTGTGTTGAGGGCAACCATAGGATATTGGTGTATGAGTTTATGGAGAACAATAGCCTTGCAAGTACTTTGCTTGGTTCCAAAACTAAACACCTTGCTTTGGACTGGCCAAAGAGGGCTGCTATTTGCTGTGCTACAGCTACTGGTCTAGCATTTCTTCATGAAGAGGTTGTACCAAACATTGTGCATAGAGATATCAAGGCTAGCAACATTCTGCTTGATGAAAACTTCAATCCTAAAATAGGGGACTTTGGCCTGGCAAAACTTTTTCCCGACAATGTCACTCATGTTAGTACTCGAGTGGCAGGAACTGTGGGATATCTTGCACCAGAATATGCTCTTCTAGGACAACTTACAAAGAAAGCAGATGTGTACAGTTTTGGGGTTCTCATACTTGAAATAGTCAGTGGTAAAAGTAGTAGCAAAGCTGCCTTTGATGAGAATCTGTTGGTTCTAGTGGAATGGGTATGGAAACTGAAAGAAGGAAATAGACTTCTGGAAATTGTTGATCCAGAACTAACTGATTATGATGAGTCCGAGGTGCTGCGTTTCATTAAGGTTGCTCTGTTTTGTACACAAGCAGCTGCACAGCAAAGGCCCTCCATGAAGCAAGTAGTTGAAATGCTTACCAAGCATGTACATATTAATGAGAAGGCATTGTCTGAGCCGGGTGTATACATGCGGCACGCTTCCAAAAATCTTGGTACTTTAGATGAGTCATCGTcttctcatgcatacaagcTCAAAAGGTCTGAAAATCCTGATGCAAGCTCAACCCAATTCAGTGGTGATGATATTGTAACGGAGATGGTTCCGAGGTG 1139 0.4109 MPMISNCFGSLNWCKGRKDPSAQSEQVIATKTFSYSSLRSATGDFHPSSRIGGGGYGVVYKGVLKDGTPVAIKSLSVESKQGTHEFMTEIDLISNIQHPNLVQLIGCCVEGNHRILVYEFMENNSLASTLLGSKTKHLALDWPKRAAICCATATGLAFLHEEVVPNIVHRDIKASNILLDENFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLILEIVSGKSSSKAAFDENLLVLVEWVWKLKEGNRLLEIVDPELTDYDESEVLRFIKVALFCTQAAAQQRPSMKQVVEMLTKHVHINEKALSEPGVYMRHASKNLGTLDESSSSHAYKLKRSENPDASSTQFSGDDIVTEMVPR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00276 379 Gene3D Transferase(Phosphotransferase) domain 1 121 333 - -
Bva02g00276 379 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 369 - -
Bva02g00276 379 SUPERFAMILY Protein kinase-like (PK-like) 18 315 IPR011009 -
Bva02g00276 379 ProSiteProfiles Protein kinase domain profile. 45 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00276 379 SMART serkin_6 45 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00276 379 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 369 - -
Bva02g00276 379 MobiDBLite consensus disorder prediction 351 379 - -
Bva02g00276 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Bva02g00276 379 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Bva02g00276 379 Pfam Protein tyrosine and serine/threonine kinase 49 315 IPR001245 GO:0004672|GO:0006468
Bva02g00276 379 Gene3D Phosphorylase Kinase; domain 1 12 120 - -
Bva02g00276 379 CDD STKc_IRAK 64 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00276 Bva-Chr2 4275604 4279221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00276 15 349 Receptor kinase-like Gene Family AT1G56120 49.558 3.63e-109 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva02g00276 PK_Tyr_Ser-Thr 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00276 - - gmx:100785766 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00276 02 4275604 4279221 Bva02g00276 02 4275604 4279221 ECH