Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00233 ATGGATGTGATAAAGTCGCAGCAAATATCTTCGAGGCCCATCGAGAAGGTTATAGTGCATCCACTCGTTCTTCTCAGCATCGTCGATAACTACAATCGGGTCGCCAAAGATACCCGCAAGCGTGTAGTCGGAGTCTTACTCGGTAGCTCCTTCAAAGGCACCGTCGATGTCACCAACAGCTTTGCTGTGCCTTTTGAGGAAGATGACAAGGACCCTAGCATCTGGTTCCTTGATCATAACTACCATGAATCCATGTTCTCTATGTTCAAGAGAATAAATGCTAAGGAGCATGTTGTGGGATGGTATAGTACAGGTCCAAAGCTACGAGAGAATGACCTTGATATTCACGGACTATTTCACAACTATGTCCCAAATCCTGTCTTGGTCATTATTGATGTCCAGCCTAAGGAACTGGGGATACCCACCAAAGCTTACTATGATGTTGAAGAAGTAAAGGAGAATGCTACACAGAAAAGCCAGAAGGTTTTTGTTCACGTGCCTTCAGAAATCGCTGCTCACGAGGTTGAGGAAATTGGAGTGGAACACTTACTCAGAGATGTGAAAGATACAACTATTAGTACACTTGCAACTGAGGTTTCTGGTAAACTTACAGCTTTGAAGGGCTTAGATGCAAGATTACAAGAGATACGTGGTTACCTCGATCTGGTTATCGATGGAAAGCTTCCACTAAACCATGAAATACTTTACCATCTACAgGATGTTTTCAACCTTCTTCCAAATCTCAATGTGTCTGAGTTAATCAAGGCCTTTGCAGTTAAAACAAATGACATGATGTTGGTCATATATCTCTCCTCTCTCATCCGAAGCGTCATTGCACTTCACAACTTGATAAACAACAAGATGCTGAATAAAGAACATGAGAAAGCTGAAGATGCAAAGCCAATTGCAGTTCCTGCTGTCAGTGGAAGCTG 932 0.427 MDVIKSQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNSFAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSGKLTALKGLDARLQEIRGYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSELIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAKPIAVPAVSGS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00233 310 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 1 310 - -
Bva02g00233 310 CDD MPN_RPN7_8 15 295 IPR033858 GO:0005838
Bva02g00233 310 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bva02g00233 310 Gene3D Cytidine Deaminase, domain 2 9 194 - -
Bva02g00233 310 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 310 - -
Bva02g00233 310 ProSiteProfiles MPN domain profile. 17 151 IPR037518 -
Bva02g00233 310 Pfam Maintenance of mitochondrial structure and function 174 285 IPR024969 -
Bva02g00233 310 SMART pad1_6 16 150 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00233 Bva-Chr2 3740867 3744021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00233 19 248 Eukaryotic Initiation Factors Gene Family AT2G39990 29.060 2.07e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00233 K03038 - vvi:100247677 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00233 02 3740867 3744021 Bva02g00233 02 3740867 3744021 ECH