Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00178 ATGCACTATGATAATGCAAGGGTACTTGACTGGAGAGGGTATCCTTCATCATCTTTACCATCTGAATTTCACCCGAGGAAACTTGCCATACTCAATTTGCATAATAGTTTCCTTACATGGTACAAGGCATTCAAGTTAaaggagattaatttttgggGGTGTAAATTTGTAAAACAGGTTTCAGATTTATCGGAGGCCCGTAATTTGACAGAACTACACATTGActtttgcaagaatttgatTATAATTCATGATTCTATTGGATTTCTTCATAAACTTAAAGTAATTTCTGCAGAATCATGTGTCAACCTTAGGATTTTCTCACGTTTCATAATGTTAAAGTCTCTTAAAATGTTAAACCTCAAGTATTGCTCAAGTTTACATTATTTCCCTGAAATTTTAGAAGACATGGAAAATCTGTCATATATCTACTTGCGTAAAACTGCCATAGAAGAATTGCCTTGTTCAATTCATAATGCCACTGGGCTTTCCTGTTTGGAGCTGTCATTCTGTGAAGGGCTTAAAAAGGTCCCTACTTGCATTCTTAAGTTGCCAAAACTTGAGAGATTGCATGTAGTTTTATCTTCAGTTCAGTTTAATAAAGAGCGTGGAGAGCAAGACCAAGTGAGGTCAACTCAGGAAAGGATTGATCTTCAGTGCTGTAATTTCTTAGACGGATTTCTTCCAACATTCCTTGGCTGTTTATCGAATGTGGCACATTTGATTCTAGGTGACAGTAGTTTAACATTACTTCCAGAAAGCATACAGGAGTGCAAGTTTTTAAGTCACCTCAACTTGGACAACTGCAAGCAGCTTCGAGAAATTAGAGGGATTCCACCTAATATCAAAGTACTCTCAGCCATAAATTGCACATCATTGGTAACATTACTTCCAGAAAGCATACAGGAGTGCGAGTTTTTAACTGACCTAAACTTAGATAACTGCAAGCAGCCTCGAGAAATTAGAGGGATTCCACCTAATATCAAAGTACTCTCAGCCATAAATTGCACATCATTGACACCTTCTGCTTTAAGCTTACTGGTTGACCAGGTATATATCACTTTGCCAGGAACAAGGATCCCAAAATTTTTTGACCACTATGGCAAGAGAGAGTCTTTGTCATTCTGGTTTCGTAATAAATTCCCAGATATTGCTCTATTTGTCGTTGTGGGCccaaataaaatgtttagCTCAATCACGTTTGAATGTAATGTTTCTGTCAATGGCAATCTACTGGATCATTGGTTTCAATCTTATCCCATATCAGAGGTGGAGAATACATTTCAGTATAATCTTCGCCGTCGACTTAATTTGGATGAACAAGGAATGGTATATCCAGAAGACGAATGGAATCATGcagaaatatcatatatattcaaaacatataaagtgggaagaaggaaaaagccTTTGGTACAACAAACAGGGATTTATATATTCGACAGAGCTAGAAATCAGAGGGATATTCTATTCACAAATCCTAATCCTAAGTA 1493 0.3483 MHYDNARVLDWRGYPSSSLPSEFHPRKLAILNLHNSFLTWYKAFKLKEINFWGCKFVKQVSDLSEARNLTELHIDFCKNLIIIHDSIGFLHKLKVISAESCVNLRIFSRFIMLKSLKMLNLKYCSSLHYFPEILEDMENLSYIYLRKTAIEELPCSIHNATGLSCLELSFCEGLKKVPTCILKLPKLERLHVVLSSVQFNKERGEQDQVRSTQERIDLQCCNFLDGFLPTFLGCLSNVAHLILGDSSLTLLPESIQECKFLSHLNLDNCKQLREIRGIPPNIKVLSAINCTSLVTLLPESIQECEFLTDLNLDNCKQPREIRGIPPNIKVLSAINCTSLTPSALSLLVDQVYITLPGTRIPKFFDHYGKRESLSFWFRNKFPDIALFVVVGPNKMFSSITFECNVSVNGNLLDHWFQSYPISEVENTFQYNLRRRLNLDEQGMVYPEDEWNHAEISYIFKTYKVGRRKKPLVQQTGIYIFDRARNQRDILFTNPNPK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00178 497 Gene3D Ribonuclease Inhibitor 109 200 IPR032675 -
Bva02g00178 497 Gene3D Ribonuclease Inhibitor 2 108 IPR032675 -
Bva02g00178 497 Gene3D Ribonuclease Inhibitor 211 345 IPR032675 -
Bva02g00178 497 SUPERFAMILY RNI-like 9 354 - -
Bva02g00178 497 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 292 441 IPR044974 GO:0006952
Bva02g00178 497 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 46 293 IPR044974 GO:0006952
Bva02g00178 497 PANTHER NB-ARC DOMAIN PROTEIN 292 441 - -
Bva02g00178 497 PANTHER NB-ARC DOMAIN PROTEIN 46 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00178 Bva-Chr2 3000009 3003390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00178 7 192 WRKY Transcription Factor Family AT4G12020 35.176 2.27e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00178 - - mtr:MTR_8g039870 316.62