Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00172 ATGAAGGATGGAAGCCCTGGTTTTGAAGAGGTAGAGCATGTAGATGCCACTTTTAAGGtgcttaaatatatatatgccttttGTGTTTCGGATTTTATTCCATGTTTGAGGGCATTTGACTTGGATGAtcatgagaaaattttgaagaaggCTTTGACGACGTTGGGGAGGTATCATGATCCCATCATTCATGAGAGAATGGAACAATGGAAGAATGGAACAAAGTCAACTAAAGAGGATCTGCTCGATGTTCTTATTGCACTTAAAGACGAAGATGGTAACGCACTATTGACGATGGAGGAAATCAAAGCCCAAATTATAGAAGTGATGATTGAAGTAGTTGACAATCCGTCAAATGCAGCTGAGTGGGCAATCGCAGAGATGTTGAATAACCCTGAATTGCTTCAAAGAGCCACTGAAGAATTAGACAGAGTGGTTGGAAAGGAAAGGCTCGTCCAAGAATCAGATTTGCCTAAGCTCAACTATGTCAAAGCTTGTGCAAGAGAAGCCTTTCGCCTTCACCCCATTGTGCCTTTCAATGTTCCCCATGTCTCTATGGCTGACTCAGTaatcaacaattattttatcccAAAGGGTAGCCATGTATTGTTAAGCAGAATGGGACTTGGGAGAAACCCTAAAGTTTGGAATGAACCTCTAAAGTTCAAACCTGATCATCATCTTAAGAGTGATGGGTCTGAGGTGGTTTTGACAGAGtcaaatttagggtttatatcgTTTAGCACAGGAAGGCGTGGCTGTCCAGGGGTTGTGCTTGGCACTTCAATGACTGTTATGCTGTTTGCTAGGTTGCTCCGTGGCTTTTCATGGAGTGTGGCACCAAATCAATCAAGCATTGATTTATCTGAAGCTGAAGGTGATCTCTTTCTTGCCAAGCCACTTGTAGCTATAGCAAACGCAAGATTACCATTGCACTTGTACccaagata 950 0.3916 MKDGSPGFEEVEHVDATFKVLKYIYAFCVSDFIPCLRAFDLDDHEKILKKALTTLGRYHDPIIHERMEQWKNGTKSTKEDLLDVLIALKDEDGNALLTMEEIKAQIIEVMIEVVDNPSNAAEWAIAEMLNNPELLQRATEELDRVVGKERLVQESDLPKLNYVKACAREAFRLHPIVPFNVPHVSMADSVINNYFIPKGSHVLLSRMGLGRNPKVWNEPLKFKPDHHLKSDGSEVVLTESNLGFISFSTGRRGCPGVVLGTSMTVMLFARLLRGFSWSVAPNQSSIDLSEAEGDLFLAKPLVAIANARLPLHLYPR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00172 316 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 5 314 - -
Bva02g00172 316 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 247 256 IPR017972 GO:0005506|GO:0016705
Bva02g00172 316 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 314 - -
Bva02g00172 316 Pfam Cytochrome P450 25 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00172 316 SUPERFAMILY Cytochrome P450 9 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00172 316 PRINTS E-class P450 group I signature 164 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00172 316 PRINTS E-class P450 group I signature 254 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00172 316 PRINTS E-class P450 group I signature 121 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00172 316 PRINTS E-class P450 group I signature 205 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00172 316 PRINTS E-class P450 group I signature 244 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva02g00172 316 Gene3D Cytochrome P450 2 300 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00172 Bva-Chr2 2948973 2950035 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00172 2 315 Cytochrome P450 AT5G05260 57.460 3.76e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00172 - K12153 jcu:105638782 466.848