Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00156 ATGATAGTTGCTATGGACTTGAATGCCTCGCCAGTGCCGGAAGATGACGAAGAGAATTTTGAGGGACACGTGGTAGAAGAATATAGTGCCCCAGAAGAACGCATAGAAAGTGCTGTTGATATTGCACGCCGGGAGcgtgaggaaagaaaaagaagactGAAAAGAGAACGTCCAGATGACAAACCTGTGCATGTATCACAGTCAACTGGTTATGATCAACCATTTTATACAAAGACCCTGAAGACATATGACAAAACTAAGCTTCCTCCGGGTTGGTTGGACTGCCCTTCGTTTGGCCAGGAAATTTGTTGCATGATACCTTCGAAGGTTCCGCTTGGTGAATCATTCAATGACTACATTGCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAGCAAAGAGTGTTAGGGAGAAAACTTGGTTTGGTGATTGATTTGACAAATACTTCTCGATACTATCCAGTGACAGATCTGAAGAAGGAGGGTATCAAGCATGTTAAGATCCAATGCAAGGGCCGTGATTCTGTACCTGATAATTTGTCCGTGAATCAGTTTGTCTATGagGTTACACAATTTTTATCACGTCAAAAACACTCAAAGAAGTATATACTTGTCCATTGTACACATGGTCATAATCGTACAGGATACATGATCATCCACTATCTTATGCGCTCTATGTCAATGTCTGTTACTCAGgcaataaaaatatttgctgAAGCACGCCCTCCAGGAATCTACAAACCTGATTACATTGATGCTTTATACGCATTTTATCATGAAAAGAAGCCTGAAATGGTTGTTTGTCCTCAGACTCCGGAGTGGAAGAGATCTTCTGAGTTTGATCTCAATGGAGAAGCGGTGccagatgatgatgatgatggagtACCGGGACCTCCTCAGCATGAGAACCATGAAACAGATGCAGTCATGACAAATGATGATGTTTTGGGTGATGAGATACCTACTGATCAGCAAGATGCATTCCGGCAGTTCTGCTATCAAACACTCAAATTGGGCGCAGGGGGCAGAGGACACTCACAATTTCCAGGGTCACATCCAGTTTCTCTTAACAGGGACAACTTACAATTGTTACGACAACGATATTATTACGCCACATGGAAAGCTGATGGAACACGATACATGATGCTAATAACTATGGATGGATGTTACCTAGTTGATAGAAGTTTCAATTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGGGAACAAATGATGGTTTGGCAGAGAAGACCCACCATTTTACATTACTGGATGGGGAGATGATCATTGACACATTGCCAGATTCACAGAAGCAAGAGAGAAGATACCTGATATATGATCTGATGGCAATCAACCAAGTATCAGTAATAGAGCGACCTTTCTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCTAGAACGACATAGTATATATCAGAGCAGAAATCCTTACTATAGATATGACATGGAACCATTCAGGGTGAGGAGGAAAGACTTTTGGTTGCTCTCTACTGTCACAAAGCTTCTAAAAGAATTCATTCCCAGACTTTCGCATGATGCTGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATATACCTCGCACTCATGAAGGCCTCTTAAAGTGGAAGTATCCCGAGATGAATTCAGTTGATTTTCTCTTTGAGATTGAGGATGATCGTCAGCTACTTGTTCTCTATGAACGAGGAAAGAAGAAACTCATGGAAGGGAATAGAGTTGCATTCAGAGATGGTTCAGATCCTTCTATTTATTCTGGAAAGATCATAGAGTGTTCATGGGATTCTGAAGAACAAGAATGGGTATGCATGCGTGTCAGAACCGATAAATCAACACCAAATGATTTCAACACCTATAAGAAGGTGATGCGAAGTATAAAAGACAACATCACAGAAGatattttgttgaatgaaatatatgaGATCATTCGCCTTCCCATGTATGCGGACAGAATCAGAATTGATAGCAAAGCTGCTCATCGCCAGCAGCACAACACAGCCCGGCGGAGGTG 2054 0.4012 MIVAMDLNASPVPEDDEENFEGHVVEEYSAPEERIESAVDIARREREERKRRLKRERPDDKPVHVSQSTGYDQPFYTKTLKTYDKTKLPPGWLDCPSFGQEICCMIPSKVPLGESFNDYIAPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVTDLKKEGIKHVKIQCKGRDSVPDNLSVNQFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRSMSMSVTQAIKIFAEARPPGIYKPDYIDALYAFYHEKKPEMVVCPQTPEWKRSSEFDLNGEAVPDDDDDGVPGPPQHENHETDAVMTNDDVLGDEIPTDQQDAFRQFCYQTLKLGAGGRGHSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLVDRSFNFRRVQMRFPCRGTNDGLAEKTHHFTLLDGEMIIDTLPDSQKQERRYLIYDLMAINQVSVIERPFYERWKMLEKEVIEPRNLERHSIYQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDPYIPRTHEGLLKWKYPEMNSVDFLFEIEDDRQLLVLYERGKKKLMEGNRVAFRDGSDPSIYSGKIIECSWDSEEQEWVCMRVRTDKSTPNDFNTYKKVMRSIKDNITEDILLNEIYEIIRLPMYADRIRIDSKAAHRQQHNTARRR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00156 684 Pfam Dual specificity phosphatase, catalytic domain 140 260 IPR000340 GO:0008138|GO:0016311
Bva02g00156 684 ProSiteProfiles Dual specificity protein phosphatase domain profile. 110 266 IPR020422 GO:0006470|GO:0008138
Bva02g00156 684 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 185 254 IPR000387 GO:0016311|GO:0016791
Bva02g00156 684 CDD Adenylation_mRNA_capping 343 553 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bva02g00156 684 PANTHER MRNA-CAPPING ENZYME 3 683 - -
Bva02g00156 684 SUPERFAMILY Nucleic acid-binding proteins 555 666 IPR012340 -
Bva02g00156 684 Pfam mRNA capping enzyme, catalytic domain 354 552 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bva02g00156 684 Pfam mRNA capping enzyme, C-terminal domain 556 649 IPR013846 -
Bva02g00156 684 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 314 553 - -
Bva02g00156 684 MobiDBLite consensus disorder prediction 296 310 - -
Bva02g00156 684 MobiDBLite consensus disorder prediction 284 310 - -
Bva02g00156 684 PIRSF mRNA_capping_HCE 75 684 IPR017074 GO:0004484|GO:0006370|GO:0140818
Bva02g00156 684 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 278 IPR029021 -
Bva02g00156 684 MobiDBLite consensus disorder prediction 1 20 - -
Bva02g00156 684 SMART dsp_5 122 262 IPR020422 GO:0006470|GO:0008138
Bva02g00156 684 MobiDBLite consensus disorder prediction 36 70 - -
Bva02g00156 684 Gene3D Protein tyrosine phosphatase superfamily 63 283 IPR029021 -
Bva02g00156 684 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 683 - -
Bva02g00156 684 ProSitePatterns Tyrosine specific protein phosphatases active site. 207 217 IPR016130 GO:0016311|GO:0016791
Bva02g00156 684 Gene3D - 551 659 IPR012340 -
Bva02g00156 684 ProSiteProfiles ATP-dependent DNA ligase family profile. 436 580 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bva02g00156 684 MobiDBLite consensus disorder prediction 36 63 - -
Bva02g00156 684 CDD RNA_5'-triphosphatase 91 257 - -
Bva02g00156 684 Gene3D DNA ligase/mRNA capping enzyme 313 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00156 Bva-Chr2 2780587 2793565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00156 1 676 Protein tyrosine phosphatase (PTP) family AT3G09100 71.994 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00156 K13917 - gmx:100776633 1209.51