Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00149 ATGGATTTCTTCTCGAGTGTTGCAAGCAGGACTCGTCGCCAGAGGCAGCTATACAGTGGTGCTTCTGGTTCTGGAAACGGAAATGGAGGAAGcagagaaaaaaggaaatctGGGTCAGAACCTTCTTCGTTTTCAAGGGGCAGAGAGAGTACCAGAAGCAGATCAGTTGCAGAAAAAGGGGTTTCCAGTTCAATGGGtaggagaagaaaaggaaggagaTTGCAAGATGATGATATGATTTTCTTGGGTGAAAGCAttgataaagagaaagagaccTCTGATTCGGTTGAACCTGAACTTAACAAGGGAAAAAGGGTTGTAGATGACGATATTGATGATTCTGATTCGGTAGGGGTGATTGAATTTGATGAAGGAATGGAGTACTGGGAAACTGATGAGGAAATAGAAGTTATTGAGCTTGATGATAGTGAGAAGGAGATGGAGGTTGAAGAAAATGGCGATATTGGTGATAAAGGTGAAAACTTTATCGAAGTAGAAGATGGACTGGGGCCAGTTTCAGATAAATCTGTTCCGATTGAGCAAAAGCAGTTAGAGGCTGATTCAGATGACAAGAATTGGGGCTTTGATGAGTCTAATCCTATTGAACTCAGTGAAAGTAGTGCAGATTCAGATTCAGAAGCTAATGCTGATTctgatgatatttttatatcttctgAAAGTGAGGATGATAACAGTAGTGATGAGGATTATAGGATGGGTGAGAGTGAAAGTGATGATAGTGACAAGGAAAGTGATGAAGAGATTTCTGTGGCTAGTGTAGATGATGATTCTGTGGGTAAAAGGACTGGTGgcatggagaagaagaaaagcagcCAGCTTCACCCCAACaagtttgaatattttgatgatattgaGTTCTTGGGGGAAAGCATGCCCACCATGGAGACTGAAAGCAGTGGGATTGGCCGAAATAATGGCGATAATACTGCTGTATTGTCTGGTGAACAGCAAGTCCAGAATGTCTTCAAGGATACAGGAATTTCTGCTGCGAAATCTGGTGTAGCTTGCTCTACCAATCTAcctgaaaaggaagaaaagaaagcaaaagaggaTTCTGAAAGCAATGATGTATGTGTTGGGCAAAGCAATGAGAAAGTTCAATCTGTTTGCAAGGATGTGGCACGTTCTGGTGTAACCAAGCATTCTGAAAAGGAATCAAAGAGGGCAGAAGAGAAGCAGAAAGCAAAGGCAGTTACATCAGAAAGATTCAGTGATAACCATCTCAATGTTAGAATGTCAAAGAACCAGAAAGAAATGGGGCCTTCAACAAAAGCCTTTAAGACGGTTGAAGAcagaaataaaggaaaggaagtgCAGGAGACTAAGAAGGATGGTAAACtggataaaaaagaaaggaggtTTGTAGTCAAGGAGAAGACTGGTTCATCTAATGACTTGCATCTTGTTGAGCTTCTTTCTGATTGTATTTTGGGCAAGCATAATGCCGGTAAGAGTAAAACTATTCAATCTGACATAGAAGTTAATGTTGATGCTGAGCCACCATCATCTGAAGAGACGCTTCCCTTGAAGTTTATTTTTGGGAAAGAGAAGCCTAAACCAGTTGAAAAATCAGAGTTTGAGAAGGACTTGGATAGGTTGTGGGAAGAGTATGACATTGTCACTAAATTGGATGAAATTGGTGCTGtgGTTggcaaggaagagaaagaaccAGAAAGAGGATGTAAAAGAACTCCAGCTATCCATTGTAGTCATGATTATGTTCTTGATGAGGAGATTGGAATGTGTTGCAAAATTTGTCAGCATATTGCCATAGAGATCAGATATATCTCACCATTAGTGGAGGAAAACTTTTGTCTGGCAGGATCTGGACACAGGCGGCAATCATCTGGTGAAGCAGATATGACATCCACTGATGGAATTCAGTTCAAAGCTTGTGGTGATAGTTCAGAGGCTGCCTTCAATCTAAATGGAGGCACAGTTTGGGATATAATCCCTAATGTAAAAGAAGATTTGCATCCTCATCAACAGGAAGGTTTCGAGtttatttggaaaaatttGACTGGAACCACTGAGCTTCACAAGTTGAAGAGTGCTGATCCAAATAGGCCAGGTGGATGCATTATCAATCATGCCCCAGGAACTGGAAAGACACGTCTAACAATTGAGTTTCTCAAGTCATATTTGGAATTATTTCCACTCTGCCATCCTGTTATTATTGCTCCTGCCAGTGTACTGCTTACTTGGGAAGATGAGTTCCGAAAATGGGATAAAAGGATTCCTTTCCACAATGTGAGCAATCCTGAATTATCAGGAAAAGAACTTATAGGGTTTTGCTGCCATAGCCTGAAAAGGGATAAAATACGTTTGTTGAAATTGCTTTCATGGTACCGGCAGAAAAGCATTCTGGGAATCAGCTACACTTTATATGAAAAGATTGCTGGAGAAAGTACCAATGCAGAGAGAGCAAAacaaattgatttgatgaggAAGGTTCTGCTTGAAATTCCTGGCTTGTTAGTTCTTGATGAAGGCCACACTCCACGAAACAAGGAGagtcaaatttttaaagttctatCAGAAATTAAAGCTGGAAAGAGGATTCTGCTCTCAGGGACTCCTTTCCAGAATAATTTCCTGGAACTGTACAATATATTGTGCCTTGTGAAACCATCATTTGCTGATAGAATTCCAGAAGATCTGAAAAAGTTCTGCCAGAGCAAAAGATTAgtccaagaaaagaaaggactCAAACAGATGAGATGGAAAGAAGTTACAAGTGGAGATTTGAATGGATATTCTAATGATCAGGCAATAGATGAGTTGAAATTGTTGATGGCTCCGTTTGTTCATGTTCACGAGAGTAGCATACTTCATAAAAATCTTCCTGGATTGGTAGACTGTGTGGTGATCTTGAATCCTGGTAATAGGCAGAAAGATATCCTAGAGAGAATTAAATCTTCTCAAAATGCATTTGCATTTGATCACAGGTTGGCTTTGGTGTCTATCCATCCATCCCTTTTCCTCCACTGCGCCGtctcagaagaagaaaaatttctagTAGACAGGGATCTGTGGGAACAGCTTAAACCAGATCCATATGAAGGCGTTAAAACAAGATTTCTGGTGGATTTTATTCGACTGTGTGAGGCAGTTAATGAGAAAGTTATTGTGTTCAGCCAGTACAGAGATCCACTGAACCTAATCAAGGATCATCTCCATTCACTTTTCAAGTGGTCTGAGGGTAAGGAAGTGCTGCAAATGGATGGTACGCTTGAGCTAAAGCAAAGGCAGTCTTTGATTCATAATTTCAATGATTCAAACAGCAAGGCCAAAATATTACTTGCATCAACAAGAGCATGCTCTGAGGGCATTAATTTAACTGGAGCTTCAAGGGTTATATTGCTTGATGTTGTGTGGAATCCTTCGGTGGAAAGACAAGCTATAAGCCGAGCTTATAGACTTGGCCAAAAGAAAGTGGTCTATACGTATCATCTGATAACAAAGAATACTGATGAATGGTCCAAATTCACCACGCAGGCAGAAAAGGATAGGATATCAGAACGGGTTTTCTCTGCCAGGAAAAACGAGAATGACAAGCAGAAGAGTTCTGTAGTTGCTCAAGAGGATAAAGTTTTAGATAAGATGGTTCAGCTTGAGAAACTCAAGGATATGTTTGACAGTATAATCTACCAGCCAAAGGAGAAGATTTTTGGTGAGAGTTCTTG 3707 0.3742 MDFFSSVASRTRRQRQLYSGASGSGNGNGGSREKRKSGSEPSSFSRGRESTRSRSVAEKGVSSSMGRRRKGRRLQDDDMIFLGESIDKEKETSDSVEPELNKGKRVVDDDIDDSDSVGVIEFDEGMEYWETDEEIEVIELDDSEKEMEVEENGDIGDKGENFIEVEDGLGPVSDKSVPIEQKQLEADSDDKNWGFDESNPIELSESSADSDSEANADSDDIFISSESEDDNSSDEDYRMGESESDDSDKESDEEISVASVDDDSVGKRTGGMEKKKSSQLHPNKFEYFDDIEFLGESMPTMETESSGIGRNNGDNTAVLSGEQQVQNVFKDTGISAAKSGVACSTNLPEKEEKKAKEDSESNDVCVGQSNEKVQSVCKDVARSGVTKHSEKESKRAEEKQKAKAVTSERFSDNHLNVRMSKNQKEMGPSTKAFKTVEDRNKGKEVQETKKDGKLDKKERRFVVKEKTGSSNDLHLVELLSDCILGKHNAGKSKTIQSDIEVNVDAEPPSSEETLPLKFIFGKEKPKPVEKSEFEKDLDRLWEEYDIVTKLDEIGAVVGKEEKEPERGCKRTPAIHCSHDYVLDEEIGMCCKICQHIAIEIRYISPLVEENFCLAGSGHRRQSSGEADMTSTDGIQFKACGDSSEAAFNLNGGTVWDIIPNVKEDLHPHQQEGFEFIWKNLTGTTELHKLKSADPNRPGGCIINHAPGTGKTRLTIEFLKSYLELFPLCHPVIIAPASVLLTWEDEFRKWDKRIPFHNVSNPELSGKELIGFCCHSLKRDKIRLLKLLSWYRQKSILGISYTLYEKIAGESTNAERAKQIDLMRKVLLEIPGLLVLDEGHTPRNKESQIFKVLSEIKAGKRILLSGTPFQNNFLELYNILCLVKPSFADRIPEDLKKFCQSKRLVQEKKGLKQMRWKEVTSGDLNGYSNDQAIDELKLLMAPFVHVHESSILHKNLPGLVDCVVILNPGNRQKDILERIKSSQNAFAFDHRLALVSIHPSLFLHCAVSEEEKFLVDRDLWEQLKPDPYEGVKTRFLVDFIRLCEAVNEKVIVFSQYRDPLNLIKDHLHSLFKWSEGKEVLQMDGTLELKQRQSLIHNFNDSNSKAKILLASTRACSEGINLTGASRVILLDVVWNPSVERQAISRAYRLGQKKVVYTYHLITKNTDEWSKFTTQAEKDRISERVFSARKNENDKQKSSVVAQEDKVLDKMVQLEKLKDMFDSIIYQPKEKIFGESS 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00149 1235 Gene3D - 648 921 IPR038718 -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 142 282 - -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 431 455 - -
Bva02g00149 1235 CDD SF2_C_SNF 1031 1160 - -
Bva02g00149 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 831 1188 IPR027417 -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 180 196 - -
Bva02g00149 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 655 942 IPR027417 -
Bva02g00149 1235 SMART ultradead3 661 897 IPR014001 -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 1 112 - -
Bva02g00149 1235 Pfam Helicase conserved C-terminal domain 1039 1149 IPR001650 -
Bva02g00149 1235 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 5 1230 - -
Bva02g00149 1235 SMART helicmild6 1060 1149 IPR001650 -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 1 32 - -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 343 368 - -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 381 455 - -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 63 112 - -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 43 60 - -
Bva02g00149 1235 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 5 1230 IPR044567 GO:0080188
Bva02g00149 1235 Gene3D - 956 1229 IPR027417 -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 383 419 - -
Bva02g00149 1235 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 691 885 IPR014001 -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 266 282 - -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 212 259 - -
Bva02g00149 1235 MobiDBLite consensus disorder prediction 347 361 - -
Bva02g00149 1235 Pfam SNF2-related domain 665 980 IPR000330 GO:0005524|GO:0140658
Bva02g00149 1235 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1037 1194 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00149 Bva-Chr2 2702414 2706646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00149 833 971 RAD5 or RAD16-like Gene Family AT5G05130 27.660 1.07e-06 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bva02g00149 SNF2_N 1.2e-19 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00149 K10875 - qsu:112002935 867.455