Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00142 ATGTTAGATTCTGGTAATTTTGTGCTTTATGGTAAAGATTTCAATGTTATCTGGGAAAGCTTTGATTCTCCAACTGACACCATATTAGGAGGGCAGAATTTATCTGTCGGAGCTCAACTGATCTCTAGTAAGTCAGAATCAGACCACTCTAGTGGACACTTCTGTCTACTAATGCAGCGTGATGGAAACCTCGTTGCCTACCCAGTAAACAACTCAGTCACGATGCTAGAAGAAGATGCTTACTGGGCATCAAATACagcttcttcctctttcaacGAACTCATTCTTGATCTTGAAGGCTTTCTTCGCCTAAATTCTACTGCCAGTTTTTATAATCTGGTCAATGGAACCGTTCTTGGAAAGAACACAACCATAGTCTACCGTGCAACACTTGAAAATGGTGGAAATTTTAGATTGTATAAGCACCTATTTGGTGGTAATGCAAACTCAACTGTGCAACTTTTATGGTCTGCTTTAACTAATCCCTGTGATGCCCATGGTATTTGCGGCTTTAACAGTTATTGCTCTAACAAAAGCAGCAATGCTATTTGTCAGTGTTTTCCTGGGTTTGTCCCCTCCAAAGATAGTAACGTGTTCCTCGAGTGCAAGCAGAACATCAGCAAAGATGATTGTTTAAGCCATACAGACTCAAAGATGTTCTATGATCTTATTCCCTTGGATAATACGTCATGGGGTGATTACCCTTATTATTCCTGGGTTTCGACGACGAAAGAAGGTTGTGGCAAGCCTTGTCAAGAAGACTGTGATTGCGGGGCAGTAACATTCGTTAATGGCAAGTGCAATAAATATAAGCTTCCACTAAGATATGGAAAGATTCAGAGTGGATCAGCCATGGCTTTCATTAAGGTGCCTTCGGAGAAATCCCCCCCTCCCATTAATCCAAATGAAGCCCAACAGGTTCATGTTGATAACAAGAAACATCTGATTTTGATTCTTGTTGTGACTTTGGGTTCCATTTCATTCTTACTTCTGGCCTTCACaatgtttgttttcttaagTTATAGGCATCGAGTTCATAGGTACAGCAAGTTGTCTGAAAATGCTAATCTGGGATTTACTAAGGAATGTTCTTTGCGATCATTTTCCTTTGATGAGCTAGTCAGCTATACAGGTGGGTTCACCCAGGAGATTGGTAGAGGATCCTTTGGAGCTGTTTATGAAGGGACAATAGCTGGAACAAACAGAAGGATTGCTGTGAAGAAAGTGGAGAGAGTTGTTGAAGAAGGGGAAAGTAAATTCCGAGCTGAAATCGCTGTCATTGCTCGAACTCATCACAGGAATTTGGTTCAGCTGATTGGATTTTGTAACAACGGATCCAAAAAGCTTCTTGTTTATGAATATGTGACCAATGGGTCTCTAGCAGATCTCCTCTTCAACATTGAAACACGCCTGTCCTGGAAAGAAAGATTGAGAATCGCGCAAGATGTGGCTAGAGGAATCTTATATTTACACGACGAGTGTGAATTCTGTATTATTCATTGCAATATAAAGCCACAAAATATACTTATGGATGAAACATGGACTCCAAAGATTTGTGATTTTGGGCTGGCAAGGCTATGGATGCAAAAGCATTCAGGAAGTAGAACAGGGATGGAGGGGACAGGTGGGTATGTGGCACCTGAATGGCTGAAGGATGAATCCATATCAGTAAAAGTTGACATTTACAATTATGGTATGTTGCTGTTGGAGATTATGTCCCGGAGAAGAAGTATCGATTTAAATTTGTCCTCGGAGGAGATACTTCTTTCCAATTGGGTATATGGTCACTTTCTAAGAGGGGAGTTGAATAGACTTGTTccagaagatgaagatgtggATTGGAGGATACTGGAAAGAATGGTGAAGATAGGGTTATGGTGTGTTCAAGAAGACCCATCATTGCGCCCTTCAATGAAGAATGTCATCTTGATGTTGGAAGGGCTGCAAGACATTCCAGTTCCTCCTTCCCCATTCCATGTTTTCTG 1985 0.4005 MLDSGNFVLYGKDFNVIWESFDSPTDTILGGQNLSVGAQLISSKSESDHSSGHFCLLMQRDGNLVAYPVNNSVTMLEEDAYWASNTASSSFNELILDLEGFLRLNSTASFYNLVNGTVLGKNTTIVYRATLENGGNFRLYKHLFGGNANSTVQLLWSALTNPCDAHGICGFNSYCSNKSSNAICQCFPGFVPSKDSNVFLECKQNISKDDCLSHTDSKMFYDLIPLDNTSWGDYPYYSWVSTTKEGCGKPCQEDCDCGAVTFVNGKCNKYKLPLRYGKIQSGSAMAFIKVPSEKSPPPINPNEAQQVHVDNKKHLILILVVTLGSISFLLLAFTMFVFLSYRHRVHRYSKLSENANLGFTKECSLRSFSFDELVSYTGGFTQEIGRGSFGAVYEGTIAGTNRRIAVKKVERVVEEGESKFRAEIAVIARTHHRNLVQLIGFCNNGSKKLLVYEYVTNGSLADLLFNIETRLSWKERLRIAQDVARGILYLHDECEFCIIHCNIKPQNILMDETWTPKICDFGLARLWMQKHSGSRTGMEGTGGYVAPEWLKDESISVKVDIYNYGMLLLEIMSRRRSIDLNLSSEEILLSNWVYGHFLRGELNRLVPEDEDVDWRILERMVKIGLWCVQEDPSLRPSMKNVILMLEGLQDIPVPPSPFHVF 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00142 661 Gene3D - 19 112 IPR036426 -
Bva02g00142 661 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 1 658 - -
Bva02g00142 661 Gene3D Phosphorylase Kinase; domain 1 364 454 - -
Bva02g00142 661 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 86 IPR036426 -
Bva02g00142 661 Pfam S-locus glycoprotein domain 121 193 IPR000858 GO:0048544
Bva02g00142 661 Gene3D Transferase(Phosphotransferase) domain 1 455 652 - -
Bva02g00142 661 ProSitePatterns Protein kinases ATP-binding region signature. 384 408 IPR017441 GO:0005524
Bva02g00142 661 ProSiteProfiles Protein kinase domain profile. 378 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00142 661 SUPERFAMILY Protein kinase-like (PK-like) 362 647 IPR011009 -
Bva02g00142 661 CDD STKc_IRAK 384 648 - -
Bva02g00142 661 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 658 - -
Bva02g00142 661 Pfam Protein kinase domain 381 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00142 Bva-Chr2 2638445 2640874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00142 365 658 Receptor kinase-like Gene Family AT5G38280 39.274 2.35e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva02g00142 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00142 - - aip:107630435 713.375