Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00112 ATGGTTGACAATTGCTTTGGTGCCTTGAATTGGTGTAAAGGGAGGAAAGATCCTTCTTCCAAGTCTCGTGCCCAAGTGATTGCAACAAAAACTTTTAGTTATAGTTGTTTGAGATCAGCAACAGGAGATTTTCATCCATTAAGCAGACTTGGTGAAGGAGGTTATGGAGTCGTCCACAAGgGAGTTCTAAAGGATGGTACGCTGGTAGCTATCAAATCTCTTTCTGTAGAATCTGAACAAGGAAAACATGAATTCATGACAGAAGTTGGTATGATATCCAATACACGACATCCAAATCTTGTGCAACTAATTGGCTGCTGTGTTGAGGGCAATCACAGGATTTTAGTCTATGAGTTTCTGGAAAACAATAGCCTTGCAAGTTCTTTGCTTGGTTCCAAAACTAAACGCATTGTTCTGGACTGGCCAAAAAGGGCTGCTATTTTCTGTGGTACGGCTTCTGGTCTAGCATTTCTTCATGAAGAGGTTGAACCAAACATTGTGCATAGAGATATCAAGGCTAGCAACATTCTTCTTGATGGAAACTTTCGTCCTAAAATAGGGGACTTTGGCCTGGCAAAACTTTTTCCTGACAACATCACTCATATCAGTACTCGAGTGGCAGGAACTGTGGGATATCTTGCACCAGAATATGCTCTTCTGGGACAACTAACAAAAAAAGCAGATGTGTACAGTTTTGGTGTTCTCATGCTTGAAATAGTCAGTGGTAAAAGTAGTACCAAAGATGCCTTTGGAGAGAATCTGTTGGTTCTGGTGGATTGGATATGGAaactgaaagaagaaaatagactTCTGGAAATTGTTGATCCAGAACTAACTGATTATGATGAGTCTGAGGTGATGCGTTACATTAAGATTGCTCTTTTTTGTACACAAGCGGCTGCGCAGCGAAGGCCCTCCATGAAGCAAGTGGTTGAAATGCTTACCAAGGATGTACACATCAATGACATTATCTG 974 0.4035 MVDNCFGALNWCKGRKDPSSKSRAQVIATKTFSYSCLRSATGDFHPLSRLGEGGYGVVHKGVLKDGTLVAIKSLSVESEQGKHEFMTEVGMISNTRHPNLVQLIGCCVEGNHRILVYEFLENNSLASSLLGSKTKRIVLDWPKRAAIFCGTASGLAFLHEEVEPNIVHRDIKASNILLDGNFRPKIGDFGLAKLFPDNITHISTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIVSGKSSTKDAFGENLLVLVDWIWKLKEENRLLEIVDPELTDYDESEVMRYIKIALFCTQAAAQRRPSMKQVVEMLTKDVHINDII 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00112 324 Gene3D Transferase(Phosphotransferase) domain 1 120 322 - -
Bva02g00112 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Bva02g00112 324 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Bva02g00112 324 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 323 - -
Bva02g00112 324 SUPERFAMILY Protein kinase-like (PK-like) 22 314 IPR011009 -
Bva02g00112 324 Pfam Protein tyrosine and serine/threonine kinase 48 314 IPR001245 GO:0004672|GO:0006468
Bva02g00112 324 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 323 - -
Bva02g00112 324 CDD STKc_IRAK 50 316 - -
Bva02g00112 324 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00112 324 Gene3D Phosphorylase Kinase; domain 1 10 119 - -
Bva02g00112 324 SMART serkin_6 44 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00112 Bva-Chr2 1940617 1944467 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00112 11 324 Receptor kinase-like Gene Family AT1G07650 52.201 3.19e-107 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva02g00112 PK_Tyr_Ser-Thr 7.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00112 - - gmx:100785766 507.679