Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00101 ATGACTGCTTGTTGGGTTGTTAAATTATATAGGATGAAGTGCTTTTCCTATTTCAAAGATAAGTCCAGGAGCAAGAGGCAAAGATCAGCACCTGAGCTGAAAGAGCAAGAAAAATCCCAACCATATTCCGGGCTTGATCGAATCACCAAGTCTTCGTGCTCATCATCATCTCCTCGTGGTATACCAGAACTGTATGAGGAGAAGGCTCATAATTTGCGAGTCTTCAGCTTTGCGGAGCTCAGGAATGCAACAAATGGTTTCAGTAGGCTTTATAAAATAGGGGAAGGTGGATTTGGATGTGTATATAAAGCTTCAATCAGGCCTGTTGATGGCAAAGGAGATCCCATTCTGGTTGCCATTAAAAGACTTAACAAGGATGGATTACAGGGTCATAAGCAATGGGTAGCTGAAGTTCAGTTTCTCGGTGTTGTAGAGCACCCAAATCTTGTCAAACTCATTGGCTACTGTGCCGTGGATGGTGAGAGAGGAATCCAGAGACTGCTTGTGTATGAATACATGCCAAATAAAAGCTTAGAATACCATCTTTTCCATAGGGCATTCGATCCTCTTCCTTGGAAAACAAGACTTGAGATAGCACTTGGAGCAGCTGAAGGATTAGCTTATCTGCATGAAGAATTAGAAATTCAGGTGATATATCGAGATTTTAAAGCCTCAAATGTGCTGCTGGATGAAAATTTTAGGCCAAAGCTTTCTGATTTCGGACTTGCCAGGGAGGGCCCTGTGGCTGGGCGTACTCATGTTTCAACTGCAGTGATGGGAACATATGGCTATGCAGCTCCAGATTACATTGAGACAGGTCATCTCACGACCAAGAGCGACGTGTGGAGTTTCGGTGTGGTACTCTACGAAATTCTCACCGGCCGGCGTTCGTTGGAGAGAAACCGGCCGAAATCGGAGCAGAAACTTTTGGAGTGGATAAAACAATTTCCTCCAGACAGCAAAAGGTTCAGCCAGATCATGGATTTTCGACTGAGGGGCCAGTATTCTATTAGTGCAGCAAGAGAAATTGGCAAGCTTGCAGACAATTGTCTGAGCAAAAGTGCAAAAGACCGGCCGACGATGAGTCAGGTGGTAGAGAGATTGAAGGTGATAATCGAAGCTTCCGATGAAGCAAAGCCAGCAGGGGAGAGAGATCAAGTATCTGAAAATGATTCAGTTGAGGCGGAAGAGAAGCCGAATCAATCAGGACCAACAGAATTGTGGAAAAGGAGAATGGCCCATCTTGCGAAACTCGGCGAGCACGTAGAGAGTGCAAGTAGAAGACGATTTATGATCCTACAGAAGGCCAATTCTGCTTCTTCATA 1325 0.4483 MTACWVVKLYRMKCFSYFKDKSRSKRQRSAPELKEQEKSQPYSGLDRITKSSCSSSSPRGIPELYEEKAHNLRVFSFAELRNATNGFSRLYKIGEGGFGCVYKASIRPVDGKGDPILVAIKRLNKDGLQGHKQWVAEVQFLGVVEHPNLVKLIGYCAVDGERGIQRLLVYEYMPNKSLEYHLFHRAFDPLPWKTRLEIALGAAEGLAYLHEELEIQVIYRDFKASNVLLDENFRPKLSDFGLAREGPVAGRTHVSTAVMGTYGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSLERNRPKSEQKLLEWIKQFPPDSKRFSQIMDFRLRGQYSISAAREIGKLADNCLSKSAKDRPTMSQVVERLKVIIEASDEAKPAGERDQVSENDSVEAEEKPNQSGPTELWKRRMAHLAKLGEHVESASRRRFMILQKANSASS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00101 441 CDD STKc_IRAK 93 369 - -
Bva02g00101 441 ProSiteProfiles Protein kinase domain profile. 87 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g00101 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Bva02g00101 441 PANTHER OS01G0588500 PROTEIN-RELATED 25 428 - -
Bva02g00101 441 Gene3D Transferase(Phosphotransferase) domain 1 173 396 - -
Bva02g00101 441 PANTHER OS07G0495150 PROTEIN 25 428 - -
Bva02g00101 441 MobiDBLite consensus disorder prediction 42 59 - -
Bva02g00101 441 Gene3D Phosphorylase Kinase; domain 1 61 172 - -
Bva02g00101 441 MobiDBLite consensus disorder prediction 24 60 - -
Bva02g00101 441 MobiDBLite consensus disorder prediction 377 408 - -
Bva02g00101 441 ProSitePatterns Protein kinases ATP-binding region signature. 93 121 IPR017441 GO:0005524
Bva02g00101 441 MobiDBLite consensus disorder prediction 24 41 - -
Bva02g00101 441 Pfam Protein tyrosine and serine/threonine kinase 91 368 IPR001245 GO:0004672|GO:0006468
Bva02g00101 441 SUPERFAMILY Protein kinase-like (PK-like) 69 368 IPR011009 -
Bva02g00101 441 MobiDBLite consensus disorder prediction 377 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00101 Bva-Chr2 1790444 1795165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00101 12 398 Glycoside Hydrolase AT3G07070 43.032 1.33e-97 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva02g00101 PK_Tyr_Ser-Thr 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00101 - - gmx:100781858 675.626