Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00096 ATGCCTCCAAGGAAGAAACCCAACACTTCTGGTTCATCTAAGAAGTCGAATCTTCACAATCAGACTCAACCTTCGAAGTTTGGAATCCAGCGTTTCTTCGAGCGCCACACCCAGAATGCCCTTTCCGCTTCTCAGAAGCTAGAAAACGCAACAGCCACTGATAGTTCTGCTACCAATGATACAACTTCTACTAGTCAAGAAAATTCCAAGTCTAATGGTGTTCGTGGATCGCGGAACAATCCAATTGTTGTTGGGTCAGAATCCATTGCCCCCAAAACTTCAGATTTTATTCTTAAGAAAGTAGGAAATGAGACGAAATTGGTGAATTCAGCGTTGCCATTGCAGAAAAATGACGAAGCTAATAATCCGCCGCATGAGACTCCTCCAGAGAATTTGGTACCGCCAGAGGAGAGTGTTTCTGAGGTTTCTCTGAAGCGCTTGAAGTTCTCACCTGGGATGTTTATAAAGCAGAGCCAGGATGATGGGGTTAACGAAGTTACATGGAAGATATCTCCAGTGAATGAAAGACTCCAATCAGTTTCAAAACATATGCCTCATATAGTTCAAGCATTGGCCGAATCTTCAAGGAACAACTTGTTGCCGATTTGGAACTGTTCAGATGATAAGGCTTCTCTGGGTAAAGATGGTCGGGATGAAAAGTTGCATGGTTTATCAATTCCCAAGGTTGTTGAAAGATCTCAATTATCAATGAGTAAAATAGGCTTGAAAAGGATAAACCCAGATCAAGGCACGGATTGTAATGGCAATGCCACCACTGTTATTAACTCTGCAGAAGCTGGTGGACAAAGTCCCTTCAGAACTCCACCATCTCTTTCTTATTGCCATGATAAGGTGCAGCTTGGCAAAGATGTTGAACACAATGGACTATCAgaccaattttatttgagacaACACAAAAAGGCATTGCTTGAACTGTTAGATCAAGTTGAGGATGCCATTTCTGTTGAAGACACTACAATTTTTGGTAACAGTACATATTCCTTGAAAGTTCAAGGGCAAAATACTGATAATCTTCCTCTGAAAGTTCACCATGCAGTAGAAAGGATAAAATCAGATATACCTAAAGAAGTTATTCGTGTGTCCCCCAATTCTCATTATCTAGTATTGGAGGTGTCTGAGAAAGTTAGGCCCGCTGATTCATCTGCTGCTCAATGCTCATACAAGGTACTTCGATTACTGAATGAACAAACTGGAGAAGAGCGAGCTGTTCAGTTGTGGGAAGAGTGGTATTGCAGTGTTATCGCACCAGGAGATACTGTTAACATCATTGGTCAATTTGATGAACAGGGAAATTGTGATATTGATCATGAtaacaattttgtaattgtacACCCAGATATTCTGGTGTCTGGAACACGGGTTGCTGGAAGTTTTGCTTGCCAAAGGAGAGCTGTCTTAGATGAGAGGGTAAGACACAGCGAGTACTCCATTGCAGCATTAACTGGAACTTTGCTTCACCAAATTTTTCAGGCTGGACTTATGAAGGAGAGCCCTACAATAAATTTCTTGGAGGAATATGCACGAGTTGTGTTCCAGAGAAACTTGGAAGGCCTGTATGCGTGTGGAGTAAACGAAAATGATGTTCTCAAAACCTTGATGGATGCTATCCCAAAATTATTGGGTTGGATCATGCTGTTCAAGGGTTCAGATGAAACAAAAGACCCTAATGTTGACTTTGGATCTCATGGGCTAAAGAAAGTTGATATATCTGAGGTAATTGATATTGAGGAGATGGCATGGGCTCCCAAATATGGTCTGAAAGGGATGATTGATGCTTCTGTCAAAGTGAAAGTACGAACAGGAAAAAATGAAGCTTATGAAGAGATCATGCCATTAGAGTTCAAAACGGGGAAGGCAATCAATAGCCAGGAACACTCTGCTCAAGTAATCTTATATACAGTCCTTATGTCTGAAAGGTACCGGAAGTCTATTGGTTCTGGACTTCTATATTATCTCCAGCCAGATCAAACGCAGgGCATTATGGTTAGAAGATCTGACTTAGTTGGGCTAATAATGCAACGTAATGAGCTTGCAAGTGATATTCTTAAAGCATTAACCACACAACAATTGCCTCCAATGTCGAAGAGACCTAGCATTTGCAGGGGATGTCGCCATCTTAATGTTTGTAGCATTTATCATAAGGTCCATGGGGGAAGCACGGAGAGCAGTGGGCTAGGAGATGTGTTTGATTATCATACTAAGCACCTGACATCTGCTCATTCTAAATTCCTCCGCCTTTGGGATCGGTTGATTGACTTAGAAGCTAAAGAGACTGAgCTTGTGAAAAAGGACATGTGGCGTTCACAAACTAGAAAGAGTCAGAACACTGGTGGCATTTCTTCTATTGTTCTTGATGCTTCAGATGGAATTCCTTGCCAGAAGTCTTTCAAAGATAGTCGTTTCATTTATCGTTTTGTACAGCAACAAGATCTTTGTTCTTTCTCTGAAGTGTGTGATGGAGATCAGTCTAATGCTTcttcaacaaataatttagatcTCACACTTAAAAACGGAGACTATGTGATACTGAGCACTGAATCTAGTTGTCAAGCTATTGCAAGTGGGGTGATCACAGATATTAGTCACATCCATGTTTCTGTTTCCTTTTCTAAGCGCTTACGGATTCCTGGAAGCTCTTCCAATACACAAGATCTCATTCAGCAGGTTTGGAGGATCGACAAGGATGAAGTTATGACTTCTTTTGCAATTATGAGGTTTAACCTTCTAAACCTTTTTCTACAAAATGATCAAAGTACACATCTGCGGAGGATGATTGTTGATCTTGAGGCTCCTAGATTTGACAGTGGAACCACCGTCAGCCAGGATCCTGCAATTTCCTATGTGTGGTCAGAGAAGAATTTGAACGATGATCAACGTAGAGCCATTCTTAAGATACTTACAGCAAAAGATTACGCACTTATACTAGGGATGCCTGGAACAGGGAAGACATCCACCATGGTTCATGCTGTGAAGTCCTTGTTGATTAGAAGCACATCCATTTTGTTGACAGCCTATACAAACTCTGCTGTTGACAATTTACTAATCAAATTGAAAGCTCAGGGCATTGATTTTGTACGTATTGGAAGACTAGAAGCAGTGCATGAGGAAGTTAGAGGACACTGCTTTTCAGCAGCAAATGTACAAAGTGTTGGGgacattaaaaaaaggttAGAACAAGTCAAAGTTGTTGCTGTTACATGTCTGGGCATCACCAGTCCCTTGCTTGCCAATATGAGATTTGATGTATGCATAATGGATGAAGCTGGACAGACAACTCTCCCAGTGTCCCTGGGTCCTTTAACATTTGCTTCAAGGTTTGTGCTTGTTGGAGATCATTATCAACTTCCTCCACTTGTCCGGAGTGCAGAGGCCAGAGAGAATGGTATGGGGGTGAGTTTGTTTTGCAGGCTTTCAGAAGCACATCCGCAAGCAATCTCAGCACTGCAGAGTCAGTACCGTATGTGTAGGGGCATTATGGACTTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGGTTCCTCTGAGATAGCTAATGCAAAGCTTCAGTTTTCTGGCTTGGAGTGTGCTTTGCCTTGGCTAAAAGATGTTTTAAATCCAGGCAGGCCAGTGATATTTATTGATACTGataagTTGCCTGCTTTAGAGGCAAGAGATCGCAAGATTGTGAATAACCCCGTTGAAGCTCGTATTATTGCTGAGGTTGCAAAGGAATTGATCAAAAATGGAATTGGAGTTGAACGTATTGGCGTTATTACCCCATATAATTCCCAAGCAAACCTTATCCGGAGTGCTACTCACCTGACTTCTTTGGAGATACACACCATTGATAAATACCAGGGTAGAGATAAGGACTGCATATTAGTATCTTTTGTGAGATCTAATGAAAATCCAACAACCTGGACGTCTTCTTCGCTGCTTGGAGATTGGCAAAGAATAAATGTCGCTCTCACACGTGCCAAGAGAAAGTTGATCATGGTGGGATCTTGTAGAACTCTATCAAAGGTCCCACTACTAAAGCTTCTCATCAACAAGGTTGAGGAGCAATCCGGAATTTTGAGTCCTTTAATGAAGGATATCAATCAGAAAGGGACTCTGGAAAGATGTTCTCAGATGAAAGATAAGTG 4151 0.4098 MPPRKKPNTSGSSKKSNLHNQTQPSKFGIQRFFERHTQNALSASQKLENATATDSSATNDTTSTSQENSKSNGVRGSRNNPIVVGSESIAPKTSDFILKKVGNETKLVNSALPLQKNDEANNPPHETPPENLVPPEESVSEVSLKRLKFSPGMFIKQSQDDGVNEVTWKISPVNERLQSVSKHMPHIVQALAESSRNNLLPIWNCSDDKASLGKDGRDEKLHGLSIPKVVERSQLSMSKIGLKRINPDQGTDCNGNATTVINSAEAGGQSPFRTPPSLSYCHDKVQLGKDVEHNGLSDQFYLRQHKKALLELLDQVEDAISVEDTTIFGNSTYSLKVQGQNTDNLPLKVHHAVERIKSDIPKEVIRVSPNSHYLVLEVSEKVRPADSSAAQCSYKVLRLLNEQTGEERAVQLWEEWYCSVIAPGDTVNIIGQFDEQGNCDIDHDNNFVIVHPDILVSGTRVAGSFACQRRAVLDERVRHSEYSIAALTGTLLHQIFQAGLMKESPTINFLEEYARVVFQRNLEGLYACGVNENDVLKTLMDAIPKLLGWIMLFKGSDETKDPNVDFGSHGLKKVDISEVIDIEEMAWAPKYGLKGMIDASVKVKVRTGKNEAYEEIMPLEFKTGKAINSQEHSAQVILYTVLMSERYRKSIGSGLLYYLQPDQTQGIMVRRSDLVGLIMQRNELASDILKALTTQQLPPMSKRPSICRGCRHLNVCSIYHKVHGGSTESSGLGDVFDYHTKHLTSAHSKFLRLWDRLIDLEAKETELVKKDMWRSQTRKSQNTGGISSIVLDASDGIPCQKSFKDSRFIYRFVQQQDLCSFSEVCDGDQSNASSTNNLDLTLKNGDYVILSTESSCQAIASGVITDISHIHVSVSFSKRLRIPGSSSNTQDLIQQVWRIDKDEVMTSFAIMRFNLLNLFLQNDQSTHLRRMIVDLEAPRFDSGTTVSQDPAISYVWSEKNLNDDQRRAILKILTAKDYALILGMPGTGKTSTMVHAVKSLLIRSTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRLEAVHEEVRGHCFSAANVQSVGDIKKRLEQVKVVAVTCLGITSPLLANMRFDVCIMDEAGQTTLPVSLGPLTFASRFVLVGDHYQLPPLVRSAEARENGMGVSLFCRLSEAHPQAISALQSQYRMCRGIMDLSNALIYGDRLRCGSSEIANAKLQFSGLECALPWLKDVLNPGRPVIFIDTDKLPALEARDRKIVNNPVEARIIAEVAKELIKNGIGVERIGVITPYNSQANLIRSATHLTSLEIHTIDKYQGRDKDCILVSFVRSNENPTTWTSSSLLGDWQRINVALTRAKRKLIMVGSCRTLSKVPLLKLLINKVEEQSGILSPLMKDINQKGTLERCSQMKDK 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00096 1383 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE 2 1378 - -
Bva02g00096 1383 Pfam AAA domain 960 1050 IPR041677 GO:0004386
Bva02g00096 1383 Pfam AAA domain 1061 1128 IPR041677 GO:0004386
Bva02g00096 1383 Pfam AAA domain 1137 1338 IPR041679 -
Bva02g00096 1383 MobiDBLite consensus disorder prediction 7 28 - -
Bva02g00096 1383 Pfam Domain of unknown function DUF83 612 717 IPR022765 -
Bva02g00096 1383 Gene3D - 1159 1371 IPR027417 -
Bva02g00096 1383 Gene3D - 887 1158 IPR027417 -
Bva02g00096 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 959 1347 IPR027417 -
Bva02g00096 1383 PANTHER DNA2/NAM7 HELICASE FAMILY 2 1378 IPR045055 -
Bva02g00096 1383 CDD SF1_C_Upf1 1161 1355 IPR041679 -
Bva02g00096 1383 MobiDBLite consensus disorder prediction 113 136 - -
Bva02g00096 1383 MobiDBLite consensus disorder prediction 35 86 - -
Bva02g00096 1383 CDD DEXXQc_DNA2 960 1160 - -
Bva02g00096 1383 MobiDBLite consensus disorder prediction 1 86 - -
Bva02g00096 1383 Pfam DNA replication factor Dna2 402 603 IPR014808 -
Bva02g00096 1383 Gene3D - 457 717 IPR011604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00096 Bva-Chr2 1692070 1709411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00096 1 1102 Core DNA Replication Machinery Family AT1G08840 53.232 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00096 K10742 - qsu:111998300 1750.72