Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00095 ATGCTTTGGGAGGACTTTTCCAACGCACTCAGTTCATCAAAATTCAGAAGCCTTCAAGTTTGGGCAGCATGGCCACAGTTAAACTCTCCCTGCTTGTTGGAGCATGTAATGCTACCTGTGGAACTTGGATTCCTGGGAATCTTCTTAGTTCAACTTCTAAGAAAGGGTGTGGAGCTGATAAGAAAGCAGAAGAGCAAGGTTTCAGATCAAGGCACACAGATGCATCCTACAGTGATAAAAGTTGGAATTTCTTACAAAGCAAGCTTGATTTGCTCTACTTTATTGCTGGCTCTTCATATATCAAGGTTACCAATGTTGATATATGGTGAGACTGAGTGTAATTCTAAACCTCAGGCCCTTGCATCAGAGATAATTCAGGTGTTATCATGGTCAATTACATTAATAGCCATATGCAAGATGGCAAAATGGTCCTTTAAATTCCCTTGGATATTAAGGGCTTGGTGGCTAGGCAGTTTCTTTTTGTGCATTACCAGCACAGTGTTTCATGTCCATTTCAGTTTCATCAACAAGGGTGAATTTGGAATAAGAGAATATGCAGACTTCCTTGATTTGCTTTCTTCAACATGCTTGCTAGGCATTTCAATAAGAGGGAGAACAGGCATTGTCTTGATTGGCACAAATGATATATCTGATCCTCTTCTCGGCGATAAAGCTGACAAACAATCTGAATGCAGAACAGAATCTCCATATGGGAAAGCTACACTTCTCCAACTTATAACTTTCTCTTGGCTCAATCCCTTGTTTGCCGTAGGCTACAAGAAACCCTTAGAACAGAAAGACATTCCCTCTGTTGACATCAAGGATTCTGCTGAATTTCTATCCTCTTCTTTTGATGAGAACCTGAAAAGGGTAAAGGAGAAAGATCTAACCACAAACCCATCTGTCTACAAGGCAATCTATTTATTTGCTAGGAAGAAAGCAGCAATCAATGCCCTTTTTGCAGTAATAAATGCTGCAGCATCATATGTTGGCCCATATCTGATTAGTGATTTTGTGGATTTCCTATCAGATAAGGAAACCAGAGGGTTGAAGAGTGGTTACCTTCTATCACTGGGATTCTTATGTGCCAAAATGGTTGAGACAATTACTCAGAGACAATGGATTTTCGGTGCTCGCCAACTAGGCCTTCGCCTCAGAGCTGCATTGACatcccatatatataaaaagggcTTACTTCTTTCAAGTAGATCGCGTCAAAGCCATTCAGGTGGTGAGATAATGAACTATATGAGTGTAGATGTGCAAAGAATCACAGATTTTGCGTGgtatattaacataatatggATGCTTCCTATACAAATTTCTTTAGCAATCTACGTTTTGCATACAAATCTAGGCTTAGGTTCATTGGCCGCGTTAGCTGCTACACTGATTGTTATGGGTTTGAACATACCTCTTACCAGAATACAGAAAAGGTACCAATCTAGGATCATGGAGGCTAAGGATGATAGAATGAAAGCCACTTCAGAAGTCCTTAGGAACATGAAGACTTTGAAGCTTCAAGCATGGGATAATCAATTCCTCCACAAGATAGAAGAACTAAGGAAAATAGAGTACAATTGGCTGTGGAAGTCATTGAGACAACAAGCATTTTCTGCCTTTATCTTTTGGGCATCACCCACATTTATTTCTGTTGTAACCTTTTGGGCATGTGACTTGATGGGGATTGAATTAACATCAGGAAGAGTTTTATCTGCATTTGCCACATTTAGGATGTTACAGGATCCAATATTTAGCCTACCTGATTTACTCAATGTCATGGCTCAAGGAAAAGTTTCAGTAGATAGAATTGCTTCTTTCcttcaagaagaagaaatccaACAGGATTCCATTGAATATATTCCGAAGGAGCAAACAGAGTTTGATATAGTTATTGAAAATGGGAGATTCAGCTGGGATCCCGATTCAAGCAGTGCAAACCTTGATGGTATAGAATTGAAAGTCAAGAGAGGAATGAAGGTGGCGATTTGTGGGTCAGTAGGTTCCGGGAAATCTAGTCTGCTTTCGGGCATTTTAGGCGAAATACACAAACAGTCAGGGAGAGTTAAGATCAGTGGAACAAAGGCTTATGTTCCACAATCTCCATGGATACTGACAGGGAATATCAGAGATAATATTATCTTTGGAAATGACTACAATAATgcaaaatatgagaaaactATTGAAGCATGTGCATTGAAGAAGGACTTTGAGCTGTTTTCCTGTGGTGATCTAACTGAAATTGGGGAAAGAGGGATCAATATGAGTGGGGGACAGAAGCAAAGGATACAAATCGCTCGTGCTGTTTACCAAGATTctgatatatatctttttgatGACCCTTTCAGTGCCGTTGATGCTCACACCGGCACCCATCTCTTTAAGGAGTGTCTCATGGGTATTCTCAAAAAAAAGACCATACTTTATGTTACCCATCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATACTGGTAATGCAAAATGGAAGGATTACACAAGCtggaaaatttgaagaacTTCTAAAGCAAAATATAGGATTTGAAGTTTTAGTTGGTGCTCATGCAGAAGCTCTAGAATCAATTCTGACAGTTGAAAATTCAAGCAAACCAACTCTAAATTCAACACCAGATGGGGAATCCAACGCCAATGTCAACTTGAACGCAGAACCTGCACATGCACAGCAAGACATAGAGCAGCAAGATAATCCTTCAGAGATCACAGGCAAAGAAGGAAAGTTggtgcaagaagaagaaagagaaaaaggaagcatTTCAAAAGAAGTTTATTGGTCTTATTTGACCACTTGCAGAGGAGGAGCTCTGGTTCCTATCATAATCCTGGCACAGTCTTCATTCCAAGTTCTACAGATTGCCAGTAACTATTGGATGGCTTGGGTTTGTCCTACATCAAGTGAGGCTCAGCCTACATATGACATGAATTTCATATTGCTTGTTTACATGGCTCTTTCTGTTGGGGGTTCTTTGTGTGTGTTGGTGAGAGCCATTTTAGTGGCAAAAGCTGGACTTTTGACAGCACAGGCACTCTTTACAAACATGTTGCATTGCGTAATCCGTGCTCCCATGTCGTTTTTCGATTCAACTCCAACCGGAAGAATCCTTAACAGGgtCTCTACAGATCAGAGTGTGCTTGATTTGGAAATGGCAACCAAAATAGGATGGTGTgctttttcaataatacagATTCTGGGGATTATTGCAGTAATGTCACAGGTGGCATGGCAAgtatttgtcattttcattccAGTGCTTGCAATCTGCATATGGTATCAAAGATATTATACACCAACTGCAAGAGAACTAGCTCGGTTAGCACAGATACAAATAGCCCCAATTCTACACCATTTTGCAGAATCATTAGCAGGAGCAGCACCAATTCGTGCTTTTGATCAGGAAGGGCGTTTCATATACACAAATCTCGTTCTTGTGGATGAATTCTCAAGGCCATGGTTTCATAATGTTTCTGCAATGGAATGGCTTTCTTTCAGATTGAATTTactatcaaattttctttttgcattctCACTGGTTTTGCTAGTAAGCCTCCCTGAAGGAATTATCAGTCCAAGCATTGCAGGGTTGGCAGTGACTTATGGGATCAATCTGAATGTCATGCAAGCTCAGGTTATATGGAATTTATGTAATGCAGAAAATAAGATGATATCAGTTGAAAGAATTCTTCAGtacctaaatataaaaagcGAAGCGCCTCTTTTGATCGAAGACTCTAGGCCACCTAAAAACTGGCCAGAAACTGGAACAATATGCTTCAAAAATTTGCAGATACGTTATGCTGAACATCTCCCATCTGTGTTGAAAAACATTAGCTGCACATTTTCTGGAGGGAAGAAAATTGGTGTTGTAGGACGAACAGGCAGTGGAAAATCAACCCTCATACAAGCCATTTTCAGGATTGTTGAACCAAGAGAGGGAAGCATTATAATTGACAACGTGGACATCTGCAACATAGGCCTCCATGACTTAAGGTTAAGGCTTAGCATCATACCACAGGATCCTGCATTGTTTGAAGGCACAGTTAGGGGCAACCTGGATCCTCTAATGCAATACTCTGACGATGAAGTGTGGCAGGCGCTCGAAAAATGTCAGCTAGGTCACCTAGTGAgagcaaaggaagaaaagcttGATTCTTCAGTGGTCGAAAATGGAGAGAATTGGAGTGTTGGCCAAAGGCAACTATTTTGTCTTGGAAGAGCCTTGTTGAAAAGAAGCAGCATACTTGTACTTGATGAAGCAACTGCATCCGTTGATTCTGCTACAGATGGAATGATACAGAAAATCATTAGACAAGAGTTTGAAAATCGGACGGTTGTCACAATAGCTCATAGAATCCACACTGTTATTGATAGTGATATGGTTTTGGTCCTCAGCGATGGGAGAATTGCAGAGTATGATTCACCATCAAAGTTACTTGAGAGAGAAGATTCCTTCTTCTCTAAACTTATAAAGGAGTATTCTAGAAGATCACATGGCTTCAACAGCATGGCAACTTA 4529 0.3862 MLWEDFSNALSSSKFRSLQVWAAWPQLNSPCLLEHVMLPVELGFLGIFLVQLLRKGVELIRKQKSKVSDQGTQMHPTVIKVGISYKASLICSTLLLALHISRLPMLIYGETECNSKPQALASEIIQVLSWSITLIAICKMAKWSFKFPWILRAWWLGSFFLCITSTVFHVHFSFINKGEFGIREYADFLDLLSSTCLLGISIRGRTGIVLIGTNDISDPLLGDKADKQSECRTESPYGKATLLQLITFSWLNPLFAVGYKKPLEQKDIPSVDIKDSAEFLSSSFDENLKRVKEKDLTTNPSVYKAIYLFARKKAAINALFAVINAAASYVGPYLISDFVDFLSDKETRGLKSGYLLSLGFLCAKMVETITQRQWIFGARQLGLRLRAALTSHIYKKGLLLSSRSRQSHSGGEIMNYMSVDVQRITDFAWYINIIWMLPIQISLAIYVLHTNLGLGSLAALAATLIVMGLNIPLTRIQKRYQSRIMEAKDDRMKATSEVLRNMKTLKLQAWDNQFLHKIEELRKIEYNWLWKSLRQQAFSAFIFWASPTFISVVTFWACDLMGIELTSGRVLSAFATFRMLQDPIFSLPDLLNVMAQGKVSVDRIASFLQEEEIQQDSIEYIPKEQTEFDIVIENGRFSWDPDSSSANLDGIELKVKRGMKVAICGSVGSGKSSLLSGILGEIHKQSGRVKISGTKAYVPQSPWILTGNIRDNIIFGNDYNNAKYEKTIEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDSDIYLFDDPFSAVDAHTGTHLFKECLMGILKKKTILYVTHQVEFLPAADLILVMQNGRITQAGKFEELLKQNIGFEVLVGAHAEALESILTVENSSKPTLNSTPDGESNANVNLNAEPAHAQQDIEQQDNPSEITGKEGKLVQEEEREKGSISKEVYWSYLTTCRGGALVPIIILAQSSFQVLQIASNYWMAWVCPTSSEAQPTYDMNFILLVYMALSVGGSLCVLVRAILVAKAGLLTAQALFTNMLHCVIRAPMSFFDSTPTGRILNRVSTDQSVLDLEMATKIGWCAFSIIQILGIIAVMSQVAWQVFVIFIPVLAICIWYQRYYTPTARELARLAQIQIAPILHHFAESLAGAAPIRAFDQEGRFIYTNLVLVDEFSRPWFHNVSAMEWLSFRLNLLSNFLFAFSLVLLVSLPEGIISPSIAGLAVTYGINLNVMQAQVIWNLCNAENKMISVERILQYLNIKSEAPLLIEDSRPPKNWPETGTICFKNLQIRYAEHLPSVLKNISCTFSGGKKIGVVGRTGSGKSTLIQAIFRIVEPREGSIIIDNVDICNIGLHDLRLRLSIIPQDPALFEGTVRGNLDPLMQYSDDEVWQALEKCQLGHLVRAKEEKLDSSVVENGENWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGMIQKIIRQEFENRTVVTIAHRIHTVIDSDMVLVLSDGRIAEYDSPSKLLEREDSFFSKLIKEYSRRSHGFNSMAT 1509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00095 1509 Pfam ABC transporter 648 782 IPR003439 GO:0005524
Bva02g00095 1509 CDD ABCC_MRP_domain1 630 830 - -
Bva02g00095 1509 SMART AAA_5 657 830 IPR003593 -
Bva02g00095 1509 SMART AAA_5 1287 1479 IPR003593 -
Bva02g00095 1509 ProSitePatterns ABC transporters family signature. 755 769 IPR017871 GO:0005524
Bva02g00095 1509 Pfam ABC transporter 1278 1426 IPR003439 GO:0005524
Bva02g00095 1509 PANTHER - 112 1504 - -
Bva02g00095 1509 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 112 1504 - -
Bva02g00095 1509 Gene3D - 1244 1497 IPR027417 -
Bva02g00095 1509 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 853 IPR003439 GO:0005524
Bva02g00095 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1251 1491 IPR027417 -
Bva02g00095 1509 Pfam ABC transporter transmembrane region 945 1188 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g00095 1509 Pfam ABC transporter transmembrane region 316 573 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g00095 1509 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1263 1495 IPR003439 GO:0005524
Bva02g00095 1509 Gene3D ABC transporter type 1, transmembrane domain 286 614 IPR036640 GO:0005524|GO:0016021
Bva02g00095 1509 Gene3D ABC transporter type 1, transmembrane domain 907 1242 IPR036640 GO:0005524|GO:0016021
Bva02g00095 1509 CDD ABCC_MRP_domain2 1259 1479 - -
Bva02g00095 1509 Gene3D - 628 858 IPR027417 -
Bva02g00095 1509 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 315 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g00095 1509 CDD ABC_6TM_ABCC_D2 942 1235 IPR044726 GO:0140359
Bva02g00095 1509 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 944 1224 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g00095 1509 CDD ABC_6TM_ABCC_D1 316 604 IPR044746 GO:0140359
Bva02g00095 1509 SUPERFAMILY ABC transporter transmembrane region 942 1243 IPR036640 GO:0005524|GO:0016021
Bva02g00095 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 846 IPR027417 -
Bva02g00095 1509 SUPERFAMILY ABC transporter transmembrane region 310 612 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00095 Bva-Chr2 1663921 1675367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00095 614 871 Calmodulin-binding Proteins AT2G36910 28.470 9.53e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00095 - - gmx:100809749 2354.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00095 02 1663921 1675367 Bva02g00095 02 1663921 1675367 ECH