Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00071 ATGGTGACCAGAACTTCTTTTCACATGGTTGTTCCAAGATATCCCACTCCAATGGGTTATATCAGTCTCTCTGAACTTGATCAAATCCAGCCCCACCGACACTCAGGAGTACTTGTCTACCTTTACAAACCGACCCAAAAGAACACTAATTTCACAGAAATAATCAAAAACTCCTTAAGCTTGATATTGGTCCACTACTACCCACTTGCTGGTCGATTGCGAAGAATCAAAGGTGGAAGATTTCAAGTAGAATGTAATGCCAAAGGAGTACAGCTCTGGGAAGCTAAATCGGAGTTGAAGATGGCTGACTATGGAGATTTTGCTCCTACTGAAGCTGTTATGAGAGATTTTTATCCCAATATTGATTATGACAGCCCCATAGAGACCTGGCCTTTGCTTATTGTGCAAGTAACCAGATTTAGCTGTGGTGGCCTCTGTCTCGTTGTTAAAACTTCTCACGTTGTGCTTGATGGTTGGGCATTATGTAAGCTTATCTGCTCATGGGCAAAGATGGCTCAAGGGGAATGTCTGGGAGAAGTTCAAATTCCTTTACATGATCGAACCTGTTTGCTATCTTGTAGAGAGCCCAAGGGCCTCAAGTTTAGGGCTTCAAGTTTTGATCACAGGCCATTCAAAACACCACCATTTTTGTTGGGATGCTCTGATAACCAAGCAGCAGAGATCAACAAGGAAACAAGCTTGGCGATTCTCAAATTTACGAAGGAGCAGGTGCAACAACTGAAGAACTCAAATGGAGATCAAAAACTGGCAGAAGGTCATCCTTGTACCACATATGAAGCTGTTGCTGCACATATATGGAGATGCGCGTGCATGGCAAGGCAAAATGATAGCCATCAACCAACTGCAATGCGATTTATTGCCAACATCCGCAGTAGATTGAATCCAAAACTTTCTTCAAATTATGCAGGGAATGGAATTTTCCCAATGTGGACAGAGGTATGCCTTTATGAGGATATAATACGGAACCCGTTGAGTTTTGCTACAAACAAGATAAGAGAAGCCCTTGAAAAACTGACAGATGAATATGTGAGGTCAGCAATGGATTTTATGGCAAATCTGGAGAATGTGGATAGGCTTAGAAGAGATGGACTCTCCTATGGGAACCCCAACGTGGATGTTGTTGGCTTGCTCAACATGCCCTTTTATGATGCAGATTTTGGCTGGGGAAGGCCTATATATGTATTTCCTGGATATTTAAGGGATGATGGCAAGGCATTTGTCATACCAAATGCTTCTGATGATGGATCTGCCACGGTAATCTTGCGGTTGCAAACAAAATACATAGAAGCTTTTAGGAAGTTGTGCTATGAGGGTACTACTCTCTTACCAAAAGATCCAGTTGATCAGTCATGCAAAGCTCAAGCTCGACTCTG 1394 0.4261 MVTRTSFHMVVPRYPTPMGYISLSELDQIQPHRHSGVLVYLYKPTQKNTNFTEIIKNSLSLILVHYYPLAGRLRRIKGGRFQVECNAKGVQLWEAKSELKMADYGDFAPTEAVMRDFYPNIDYDSPIETWPLLIVQVTRFSCGGLCLVVKTSHVVLDGWALCKLICSWAKMAQGECLGEVQIPLHDRTCLLSCREPKGLKFRASSFDHRPFKTPPFLLGCSDNQAAEINKETSLAILKFTKEQVQQLKNSNGDQKLAEGHPCTTYEAVAAHIWRCACMARQNDSHQPTAMRFIANIRSRLNPKLSSNYAGNGIFPMWTEVCLYEDIIRNPLSFATNKIREALEKLTDEYVRSAMDFMANLENVDRLRRDGLSYGNPNVDVVGLLNMPFYDADFGWGRPIYVFPGYLRDDGKAFVIPNASDDGSATVILRLQTKYIEAFRKLCYEGTTLLPKDPVDQSCKAQARL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00071 464 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 6 444 - -
Bva02g00071 464 Gene3D - 1 208 IPR023213 -
Bva02g00071 464 Gene3D - 221 445 IPR023213 -
Bva02g00071 464 Pfam Transferase family 1 440 - -
Bva02g00071 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00071 Bva-Chr2 1259213 1260607 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00071 9 444 Monolignol Biosynthesis Gene Families AT5G48930 34.096 5.10e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00071 K13065 - jre:108988418 407.142