Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00045 ATGATTCCCTCATCTctcatttccttctctcttaTAGCCCTTGTGCTCATCTTCCATTCCATAGCTGCTAATAACAACAACAGTCATCTCATCCAACAAACCTGCAAGAATTCTTCAAAAACTGATCCAAACATAAGTTACAAATTCTGTGTTTCTTCTCTCCAAGCTTTTCCCCATAGCAGCTGTGTCAAGAGCCTTCGCCAACTGGGCCTCATCTCCATCAACCTAACCCGCCATAACATTACAGACACCAAAGCTTACATTGAGAAActcttgaagaagaagaacataGAGCCCTTTGTTAAAGATTGCTTAGATGATTGTCTCGAACTTTATTCAGATGCGATCGAAACCGTTGGAGATGCCATCAAAGATTACAAGGCTAAGCGTTATGCAGATGCTAACATTGATATGAGTTCAGTTCTTGATGCCCCAACGACCTGTGAAGATGGATTCAAAGAAAGGAACGACGACGTTTCACCGCTAAAGAAGAGGAACAAGGATGCCTTTCAGCTGTCTGCTATAGCACTTTCGATTATTAATATGCTCAGCGAATA 557 0.3896 MIPSSLISFSLIALVLIFHSIAANNNNSHLIQQTCKNSSKTDPNISYKFCVSSLQAFPHSSCVKSLRQLGLISINLTRHNITDTKAYIEKLLKKKNIEPFVKDCLDDCLELYSDAIETVGDAIKDYKAKRYADANIDMSSVLDAPTTCEDGFKERNDDVSPLKKRNKDAFQLSAIALSIINMLSE 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00045 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 184 IPR035513 -
Bva02g00045 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 183 IPR035513 -
Bva02g00045 185 SMART PMEI_2 26 179 IPR006501 GO:0004857
Bva02g00045 185 PANTHER PECTINESTERASE 1 181 - -
Bva02g00045 185 Pfam Plant invertase/pectin methylesterase inhibitor 30 179 IPR006501 GO:0004857
Bva02g00045 185 CDD PMEI-Pla_a_1_like 35 182 IPR034088 -
Bva02g00045 185 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 181 - -
Bva02g00045 185 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00045 Bva-Chr2 800107 800713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00045 1 157 Carbohydrate Esterase AT3G49220 23.780 6.81e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00045 - - gmx:100306248 234.572