Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00044 ATGGCATCCACGTTCGTCACCTTATCAAAGCCATTTCTTTGCAACACAAGTGCCTTCTCTACCTCAGAACAGAGACTACCAGCTTTGCGGAGGAGCAGTCTGAAGATTAACGCAATTGGAAAGAAATGGGAACCCACTAAgGTCGTGCCGCAGGCCGATAGAGTTCTTGTTCGTCTAGAGGCACTGCCGGAAAAAACGGTTGGTGGAGTTTTGTTGCCTAAGTCAGCTGTCAAATTTGAGAGATACCTCATTGGAGAAGTTCTTTCTGTTGGAGCTGAGGTTGGAGTGGTAACGGCAGGGAAAAAGGTTCTACTCTCGGATATAAATGCTTATGAGGTGGATTTGGGGACTGATGAAAAGCACTGCTTCTGTAAAGCAAGTGACCTATTGGCTGTGGTGGAGTA 404 0.4653 MASTFVTLSKPFLCNTSAFSTSEQRLPALRRSSLKINAIGKKWEPTKVVPQADRVLVRLEALPEKTVGGVLLPKSAVKFERYLIGEVLSVGAEVGVVTAGKKVLLSDINAYEVDLGTDEKHCFCKASDLLAVVE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00044 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva02g00044 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Bva02g00044 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 17 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva02g00044 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Bva02g00044 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva02g00044 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva02g00044 134 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 17 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00044 Bva-Chr2 781798 787982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00044 46 134 Calmodulin-binding Proteins AT5G20720 34.021 2.79e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00044 K04078 - jre:109017055 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00044 02 781798 787982 Bva02g00044 02 781798 787982 ECH