Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00030 ATGCCTTCATCTGTAATATCAAGCCAAAGCATGCATCTTGGTGTGCTTGCCACTGCTTCGCATGCTGTTAGGACTAGTACCATGTTTGTGGTTTTATACAAACCAAGGACTAGCCAATTCATCATTGGCTTGAACAAATATCTTGAGGCTATGAACAAGAAGTTTTCTGTTGGTACGCGTTTCAACATGAGATTCCAAGGGGAGGATTCACCTGAGAGAAAGTATCATTGTACTATTGTTGGGGGTGGAGATATATCTCCAAAATGGTTACAGTCTGAATGGCAGTCACTGCAGGTTCAATGGGATGAACCAGCAACAATTCAAAGGCCAGAGAGGGTTTCTTCTTA 347 0.4236 MPSSVISSQSMHLGVLATASHAVRTSTMFVVLYKPRTSQFIIGLNKYLEAMNKKFSVGTRFNMRFQGEDSPERKYHCTIVGGGDISPKWLQSEWQSLQVQWDEPATIQRPERVSS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00030 115 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 115 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva02g00030 115 Pfam Auxin response factor 19 98 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bva02g00030 115 Gene3D - 54 115 - -
Bva02g00030 115 PANTHER AUXIN RESPONSE FACTOR 11 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00030 Bva-Chr2 580489 581088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00030 1 114 B3 DNA Binding Superfamily AT3G61830 71.930 3.36e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00030 K14486 - vvi:100265555 186.808